Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1420 ATGATGTTTTTGGTGGTAAGACCCTGTGGTTCTTCTTCTGCACGTATTCACCATCATCATCCTACACCGCCGCGTGGTAGCAGAAACGTCGTCGTTAGATGCTCGGTGAGCAGCAGCGTGCAGGAGAAAGAAGAGAAGGGCACCGAACTGGATTGTTCGGTGTCTTTCCCTCCGATCAGGGCGGCGAAGAGGGTGGTTCTGGTTAGGCACGGGCAGAGCACGTGGAATGCCGAAGGGAGGATCCAAGGAAGCTCCAATTTCTCGGTTCTCACCAAGAAGGGCGAGTCTCAGGCCGAGACCTCGCGCCAAATGCTTATCGACGACCACTTCGATGCATGCTTCGCCAGTCCTTTGGCTCGATCCAAGAGAACCGCTGAAATCATTTGGGGGCCTCACCACGAACCTATCATTCCCGACTATGATTTCAGGGAAATCGATCTGTACTCTTTTCAAGGTCTGTTGAAGCATGAAGGGAAAGAGAGATTTGGTTCTGCTTTTCGCCAATGGCAGGTGGATGCTGCAAATTTCAACATTGATGGTCATTATCCTGTTAGAGAGCTGTGGGATCGTGCTAGAAGCTGCTGGACTAAAATCTTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCCCTTGTTGCCACAGCAATTGGTTTGGGGCCCGAGTATTTCAGAACATTACTTCAGAGCAATTGTGGTGTTAGTGTGCTGGATTTCATCCCGAGATCTGAGGGTGGGTCTCCACATATTTGCCTTAACCGCTTAAATCAGACCCCTGGTTCATCAATTGCTGGTGGGAAATCTGGAGGTAGAGAGCCAAGTAAGCGGATCATACTTATTTGTAATGGATCAACACAAGGAAATACAGAGGATGTTTTTCCTTTTGGCGGTGATCAACCATTGAACATGCTCGGTGTCATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAATTCCATAATTAGCAGTCTTAACAAAGCTTGTATCGGGACAGCCACGATCATCTCCCAGGTACAAGAAGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCTCGATATGTTGAGATGAAGCAGATGGGGAGCTTTGATGTTGAAACTATCTTCAAACAAACTGAAACGGCTATATCCAATTTTCCACCATTTCAACCTGGGTGGTTAAATAGAGTTGATGATGGATTGAGAACAAAATTATGGGATCAATCTCGAAAAGCGTGGCAATCGCTGTTGGATGAAATATCTGATGAATCTAACCCAGAAGTTGTAGTGGCAGTTGGTCATCCTGCAATCCACATAGCTTTAATGGGGCACTGCCTTAATTTGACGAAAGAATGGTTGGGATCATTTCATCTCGACGCTGGGAGCGTTAGCCTTGTTGACTTCCCTGATGGACCTAAGGGAAAAGGTGTCATCAGGTGCTTAAATTATACTGCACATTTGGGGAGATGGTCCATACCTATTACAAGATCAACAGAGGATGGTGAAGAGTTCTAA 1521 0.4668 MMFLVVRPCGSSSARIHHHHPTPPRGSRNVVVRCSVSSSVQEKEEKGTELDCSVSFPPIRAAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDHFDACFASPLARSKRTAEIIWGPHHEPIIPDYDFREIDLYSFQGLLKHEGKERFGSAFRQWQVDAANFNIDGHYPVRELWDRARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGPEYFRTLLQSNCGVSVLDFIPRSEGGSPHICLNRLNQTPGSSIAGGKSGGREPSKRIILICNGSTQGNTEDVFPFGGDQPLNMLGVIQSQKSAELLLDLKVNSIISSLNKACIGTATIISQVQEAADCLGADCVPRYVEMKQMGSFDVETIFKQTETAISNFPPFQPGWLNRVDDGLRTKLWDQSRKAWQSLLDEISDESNPEVVVAVGHPAIHIALMGHCLNLTKEWLGSFHLDAGSVSLVDFPDGPKGKGVIRCLNYTAHLGRWSIPITRSTEDGEEF* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1420 506 CDD HP_PGM_like 64 245 IPR013078 -
Gso11g1420 506 Pfam Histidine phosphatase superfamily (branch 1) 283 473 IPR013078 -
Gso11g1420 506 Pfam Histidine phosphatase superfamily (branch 1) 65 246 IPR013078 -
Gso11g1420 506 Gene3D - 63 265 IPR029033 -
Gso11g1420 506 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 67 76 IPR001345 GO:0003824
Gso11g1420 506 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 41 506 - -
Gso11g1420 506 Gene3D - 275 493 IPR029033 -
Gso11g1420 506 SUPERFAMILY Phosphoglycerate mutase-like 63 259 IPR029033 -
Gso11g1420 506 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 41 506 - -
Gso11g1420 506 CDD HP_PGM_like 282 481 IPR013078 -
Gso11g1420 506 SUPERFAMILY Phosphoglycerate mutase-like 281 494 IPR029033 -
Gso11g1420 506 SMART PGAM_5 282 443 IPR013078 -
Gso11g1420 506 SMART PGAM_5 64 218 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1420 Gso-Chr11 16351093 16357082 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1420 K22200 - gmx:100798495 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1420 11 16351093 16357082 Gso11g1420 11 16351093 16357082 ECH
Gso12g0698 12 6960622 6966127 Gso11g1420 11 16351093 16357082 GST