Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1413 ATGTCGGAATCACCATTCAGACCACGAGAAAAGCTTGCTGAGAAGCAAAAATATTTTCAGAGTATCCACAGGCATACCTACTTGAAGGGACCCATGGATAAGATTACATCCGTGGCCATACCACTGGCTTTGGCTGCAACGTCAATTTACATGATTGGACGAGGGATCTATAATATGTCGCATGGAATTGGAAAGAAAGAATAA 204 0.4216 MSESPFRPREKLAEKQKYFQSIHRHTYLKGPMDKITSVAIPLALAATSIYMIGRGIYNMSHGIGKKE* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1413 67 PANTHER CYTOCHROME C OXIDASE SUBUNIT 7 1 67 IPR039296 -
Gso11g1413 67 Pfam Cytochrome c oxidase subunit VII 10 62 IPR039297 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1413 Gso-Chr11 16270794 16272563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1413 - - gmx:100305574 137.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0703 12 7030865 7032646 Gso11g1413 11 16270794 16272563 GST
Gso12g1535 12 38800776 38802830 Gso11g1413 11 16270794 16272563 PCT
Gso11g3310 11 48887177 48888676 Gso11g1413 11 16270794 16272563 PCT
Gso11g1413 11 16270794 16272563 Gso12g1535 12 38800776 38802830 PCT
Gso11g1413 11 16270794 16272563 Gso11g3310 11 48887177 48888676 PCT