Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1404 ATGGAGTTAGCAAGTGTTCACGACTTTCTAAAGGGAAAAACCATTTTAGTTACCGGTGCAACGGGATTCTTAGCAAAACTTTTCGTGGAGAAGATATTAAGGGTTCAACCAAACATAAAAAAGTTATACCTTCTTCTAAGAGCAGAAAATCCTCATATAGCTACCCAACGCTTGCACGATGAGGTTTTGGCGAAGGACTTGTTCAAGGTGGTACGAGAAATGTGGGGTGCAGATTTTGGCTCCTTCATATCCGAGAAAGTGTTGGCTGTTGCTGGCGATGTTTCTCTTGAGAACTTGGGACTTAAAGACCTAAACCTAAGGGAAAAGATGTGGGAAGATATAGATATCATAGTTCACGCTGCTGCTGCTACCAAGTTTGACGAGAGATTTGATATTGCAATGAGCATAAACACGATGGGAGCTCTTCATGCTCTGAACTTCGCTAAGAACTGTAGTAAAATGCAAATTCTTCTCCACTTATCTACTGCTTACGTATGCGGTGAGGCCAAAGGACTAGTACCTGAGGAGCCTTTTCACATGGGTCAGACCCCAAATAGGTCCTCAACATTAGACATCAACGTTGAAAAACTGCTAATTGAGGAAAAAATGGAGGAGCTCCGGGCACAAAATGCTGGTGAACAAACAGCCACATCGGTCATGAAAAACCTTGGAATTATAAGGGCAAATTTACACGGATGGCCAAATGCCTATGTATTTACAAAAGCGATGGGAGAGATGATTTTGTTCAATATGAAAGGTGATGTACCTTTGATCATCGCACGCCCTACTACAGTACTCAGCACTCACTCTGAACCATTCCCCGGTTGGATTGAAGGTGTGAGAACGGTTGATGTTTTTGTTGTCTTGTACGGTAAAGGAAAATTAAGAAGATCGGTTGGTCGTCGGAATACAATTATCGACGCGATACCAGCTGACATGGTGATAAATTCCATGATAATAGCATTATTAGAGGCTCAATATTCAAAGAGCCTTTCCAAGACATTGCTTTACCATATTGGTTCTTCGTTGAGAAATCCATTCACAATTTCCGATCTTGAGGATGTAGCCTATCAATACTTCACAAAAAATCCTTTGATCAACAAAAATGGAAAACCCGTGGCTATCTCCAACAAAGTTACGTGGATCTCTAGTATGAGTTCATTTGAAAGATACATGAAGATTCGATACGTGCTACCTCTAATGGGATTAAATGTGGTGAGTAAGGTATGTTGCCATTGTTACGATGATTTTCACATGGAAAGTCAACGAAAACTCCAAACATTGATGAAAATAACAAGACTTTATAAACCTTATCTCCTATTTGAGGGCACCTTTGATGACAAGAACGCAGAAATTTTACGGATGGCAAAAAACAAAGCAGGAGATGATCTTGGGAGATTTAACTTTGATCCCAGGAACATTGATTGGATGGACTATGTGTTAAACGCCCACATTCCTGGACTCGTGAAGTATGTTGTTAAGTAA 1485 0.4047 MELASVHDFLKGKTILVTGATGFLAKLFVEKILRVQPNIKKLYLLLRAENPHIATQRLHDEVLAKDLFKVVREMWGADFGSFISEKVLAVAGDVSLENLGLKDLNLREKMWEDIDIIVHAAAATKFDERFDIAMSINTMGALHALNFAKNCSKMQILLHLSTAYVCGEAKGLVPEEPFHMGQTPNRSSTLDINVEKLLIEEKMEELRAQNAGEQTATSVMKNLGIIRANLHGWPNAYVFTKAMGEMILFNMKGDVPLIIARPTTVLSTHSEPFPGWIEGVRTVDVFVVLYGKGKLRRSVGRRNTIIDAIPADMVINSMIIALLEAQYSKSLSKTLLYHIGSSLRNPFTISDLEDVAYQYFTKNPLINKNGKPVAISNKVTWISSMSSFERYMKIRYVLPLMGLNVVSKVCCHCYDDFHMESQRKLQTLMKITRLYKPYLLFEGTFDDKNAEILRMAKNKAGDDLGRFNFDPRNIDWMDYVLNAHIPGLVKYVVK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1404 494 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 327 IPR036291 -
Gso11g1404 494 PANTHER FATTY ACYL-COA REDUCTASE 6 494 - -
Gso11g1404 494 Gene3D - 5 388 - -
Gso11g1404 494 CDD FAR-N_SDR_e 13 364 - -
Gso11g1404 494 Pfam Male sterility protein 17 318 IPR013120 -
Gso11g1404 494 CDD FAR_C 417 492 IPR033640 -
Gso11g1404 494 Pfam Male sterility protein 396 494 IPR033640 -
Gso11g1404 494 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 494 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1404 Gso-Chr11 16126814 16135042 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1404 1 445 Acyl Lipid Metabolism Gene Families AT3G44560 50.112 7.78e-152 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1404 K13356 - gmx:100793736 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1404 11 16126814 16135042 Gso11g1404 11 16126814 16135042 ECH