Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1394 ATGGCGCGAGTGAACTTGGACGGAAACTCGATTCCGATGCTGGCGATATGCATGATCGGCGGTGGCGGCTTCATCGGATCGCACCTCTGCGAGAAGCTGATGGCGGAGACCAACCACAAGGCCGTCGTCGTTGACGTCTCGTCGGAGAAGATCAACCACCTCCTCGACAGATCCCTCCCCTGGGCCCACCGCATCGAGTTCCACCAAATGAACATCAAAAGCGATTCCCGCCTCGAAACCCTCGTCCAAACTACCGATCTCACGATCAATCTCGCTGCAATTTGCACACCGGCGGATTACAACACACGCCCTTTGGACACCATCTTCAGCAACTTCATTGATGCGATTCCGGTGATTAAATATTGCACTGAGAACAATAAGCGTTTGATCCATTTTTCTACGTGTGAGGTATACGGGAAGACTATAGGCAGCTTTCTCCCAGAGGAATATCGACAGGACCCCAAATATTTCATGCTCAAGGAAGATGTCACTCCTTGTACTTTTGGTCCGGTTGAGAAACAAAGATGGTCTTATGCTTGTGCAAAGCAAATGACTGACAGACTGATATATGCTGAGCATGCGGAGAATGGCCTCAAGTTCACCATTGTGAGACCTTATAACTGGATTGGTCCAAGAATGGACTTCATTCCTGGTGTGGATGGCCCATGTGATGGTGTCCCCAGAGTCTTAGCTTGCTTCAGTAATAGTCTCCTGCGAGGCGAGCCCCTCAAACTTGTTGAAGGTGGGAGATCACAGAGAACCTTTCTCTACATCAAAGATGCAATTGATGCTGTTGCTTTAATGATTGACAACCCTGAGAGAGCAGATGGGCATATCTTCAATGTGGGAAACCCAGACAATGAAGTATCTGTGAAGGAACTAGCTGAGCTTATGATAAAGGCTTATGCTAAGGTATCTGGTGTACCTGCCTCTAGTCTATCAACTCTAGACGTGAGTGCAGAGGATTTCTATGGTAAAGGCTATGATGACAGTGATAGGCGCATCCCTGACATGACAATTATCACCAAGCAGCTTGCTTGGAAGCCAAAGACACCTCTTGATGAACTGTTAGATGTTACCCTCCAATATCAACACAAGACATATTCTCGTGCTATCCAAAGAGAACTTTCAAAACTGTCAAATTGA 1146 0.4729 MARVNLDGNSIPMLAICMIGGGGFIGSHLCEKLMAETNHKAVVVDVSSEKINHLLDRSLPWAHRIEFHQMNIKSDSRLETLVQTTDLTINLAAICTPADYNTRPLDTIFSNFIDAIPVIKYCTENNKRLIHFSTCEVYGKTIGSFLPEEYRQDPKYFMLKEDVTPCTFGPVEKQRWSYACAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPCDGVPRVLACFSNSLLRGEPLKLVEGGRSQRTFLYIKDAIDAVALMIDNPERADGHIFNVGNPDNEVSVKELAELMIKAYAKVSGVPASSLSTLDVSAEDFYGKGYDDSDRRIPDMTIITKQLAWKPKTPLDELLDVTLQYQHKTYSRAIQRELSKLSN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1394 381 Pfam NAD dependent epimerase/dehydratase family 16 283 IPR001509 -
Gso11g1394 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 366 IPR036291 -
Gso11g1394 381 Gene3D - 15 373 - -
Gso11g1394 381 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 381 - -
Gso11g1394 381 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1394 Gso-Chr11 15987529 15990806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1394 K12449 - gmx:100790039 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1394 11 15987529 15990806 Gso11g1394 11 15987529 15990806 ECH
Gso12g0715 12 7211125 7214320 Gso11g1394 11 15987529 15990806 GST