Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1388 ATGGACCAGCTTCCTGTTGAAGTGATTGGGAACATTCTGTCACACTTGAGGGCTGCAAGAGATGTGGTGATAGCTTCTGCAACATGCAGGAAATGGCGACAAGCGTGCTGCAAGCACCTTCATACACTCTCCTTCAGCTCCAAAGATTGGCCCATTTACCGGGATTTGACGACTACCCGCCTCGAGATTTTGATCACACAAACCATTTTCCAGAGCTCTGGGTTGCAGGCCCTATCCATTTTGATGGAAGATGTGGATGAATTCTCGGCTTCCACCGTTACTGCTTGGCTCTTGTACACCAGGGAAACTCTCAGGCAATTGCATTATAATGTCAAGACTACGCCTAATGTTAACATTCTTGAAATATGTGGCAGGCACAAGCTGGAAATACTGGATCTGGCTCATAATTCCATTGTGGGGGTTGAGCCTAATTATCAGCGGTTCCCTTGTTTGAAATCTCTTTCCTTGAGTTATGTCAGTATATCTGCGTTGGATCTAAATCTTTTGGTGTTTGCGTGTCCAAAGATTGAAGCTTTGGAACTTGTCAATCCTGAGATTGCAATGTCTGATGCACAGGTGACCGTTGAATTGAGTAGTTTGACGCTGAAGAGTGTGTATGTAGAAGCAATCAGTTTGGACAAGTTTTTATTGGAGGCTGATGGGCTTGAGTGCTTGCACTTGAAAGATTGTGCACTCGAGTTTTTTGAACTCATTGGCAAGGGGACCTTGAAGCATTTTAAGATTGATGATGTTAGTGTTATACATCTTGATATTGGTGAGACAGTTGAGAATCTTGAGACTGTGGATATCAGCAACTTCACTATTATATGGCCAAAGTTTTACCAAATGATTTCAAGATCGTCGAATTTGAAGAGGCTTCGTCTTTGGGATGTGATGTTTGACGATGAGGATGAGGTTGTGGATTTGGAAACAATTGCGACTTGCTTTCCCTACCTGAGCCATTTATCACTGAGTTATGATGTGAGAGATGGAGTGCTTCACTATGGTTTACAAGGCTCTTCCTATCTGGAGAGTGTTGTTGTCTTGGAGCTTGGCTGGACTGTGATCAATGATCTTTTCTCCCACTGGGTTGAGGGTCTGCTTAAGCGTTGCCCCAACCTGAAGAAGTTGGTCATTCATGGGATTGTTTCTCAGGTTAAGTCTCATGAAGAATGCCAGATGTTAGCCAATTTCACTACATCCATGGTTGAGCTGATGCGGAGATACACACATGTAGATCCATATTTTAAGTATGACTAG 1260 0.4341 MDQLPVEVIGNILSHLRAARDVVIASATCRKWRQACCKHLHTLSFSSKDWPIYRDLTTTRLEILITQTIFQSSGLQALSILMEDVDEFSASTVTAWLLYTRETLRQLHYNVKTTPNVNILEICGRHKLEILDLAHNSIVGVEPNYQRFPCLKSLSLSYVSISALDLNLLVFACPKIEALELVNPEIAMSDAQVTVELSSLTLKSVYVEAISLDKFLLEADGLECLHLKDCALEFFELIGKGTLKHFKIDDVSVIHLDIGETVENLETVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPYLSHLSLSYDVRDGVLHYGLQGSSYLESVVVLELGWTVINDLFSHWVEGLLKRCPNLKKLVIHGIVSQVKSHEECQMLANFTTSMVELMRRYTHVDPYFKYD* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1388 419 PANTHER F-BOX PROTEIN-LIKE 1 417 - -
Gso11g1388 419 Gene3D - 1 44 - -
Gso11g1388 419 SMART fbox_2 4 45 IPR001810 GO:0005515
Gso11g1388 419 PANTHER - 1 417 - -
Gso11g1388 419 Pfam F-box-like 2 39 IPR001810 GO:0005515
Gso11g1388 419 Gene3D Ribonuclease Inhibitor 141 405 IPR032675 -
Gso11g1388 419 SUPERFAMILY F-box domain 1 56 IPR036047 GO:0005515
Gso11g1388 419 SUPERFAMILY RNI-like 73 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1388 Gso-Chr11 15866877 15869024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1388 - - gmx:100786847 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1388 11 15866877 15869024 Gso11g1388 11 15866877 15869024 ECH
Gso12g0722 12 7311433 7314359 Gso11g1388 11 15866877 15869024 GST