Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1386 ATGGCAACCTTGTCAACTGTGAAGGTTTCCCCCCATTGCATGTTTCAAACAGCAAGCAAAAATCCATCCACTGTTGCCACCACAATGAAGTGCCCTTCTTCTTTTGGGTCTGTGAAGAGCATTTCCAGATCTTTTGGCTTGAAGTCATCCTCTTCATTTAGAGTCACTGCCATGGCTTCTTACAAGGTTAAGCTGATTGGCCCAGATGGAACAGAGAACGAGTTTGAAGCCACTGACGATACTTACATCTTAGATGCAGCAGAGAGTGCTGGAGTTGAACTTCCTTACTCTTGCCGAGCCGGAGCATGCTCTACCTGTGCTGGGAAGATTGTTGCTGGTTCTGTGGACCAGTCTGATGGCTCATTCCTCGATGACAACCAACTGAAGGAAGGCTTTGTGCTTACTTGTGTCTCCTATCCAACTGCTGACTGTGTAATTGAAACTCACAAGGAAGGAGATCTCTATTGA 468 0.4637 MATLSTVKVSPHCMFQTASKNPSTVATTMKCPSSFGSVKSISRSFGLKSSSSFRVTAMASYKVKLIGPDGTENEFEATDDTYILDAAESAGVELPYSCRAGACSTCAGKIVAGSVDQSDGSFLDDNQLKEGFVLTCVSYPTADCVIETHKEGDLY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1386 155 PANTHER FERREDOXIN 5 155 - -
Gso11g1386 155 Pfam 2Fe-2S iron-sulfur cluster binding domain 68 141 IPR001041 GO:0051536
Gso11g1386 155 PANTHER FERREDOXIN 5 155 - -
Gso11g1386 155 SUPERFAMILY 2Fe-2S ferredoxin-like 56 152 IPR036010 GO:0051536
Gso11g1386 155 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 98 106 IPR006058 GO:0051537
Gso11g1386 155 CDD fer2 63 147 IPR001041 GO:0051536
Gso11g1386 155 Gene3D - 58 155 IPR012675 -
Gso11g1386 155 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 61 152 IPR001041 GO:0051536
Gso11g1386 155 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 59 155 IPR010241 GO:0009055|GO:0022900|GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1386 Gso-Chr11 15814649 15817304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1386 K02639 - gmx:100785611 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1386 11 15814649 15817304 Gso11g1386 11 15814649 15817304 ECH
Gso12g0726 12 7356620 7359296 Gso11g1386 11 15814649 15817304 GST