Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1378 ATGGACAACAAAAAGTCAAAATGGAGTTGGAGTTCAGCAATAATCGGAGCAGCATCCGCAGTGGCAGCGTCAGCCCTAATATCCGCGAAACCCAAGGACCCAACATTTCACCTCATTTCCATAAACTTCACCTCTTTAAAACTCAATTTCCCTCTCTTAGACGCAGAGGTTCTCCTCACGGTCCACGTCACCAACCCTAATATCGCCCCCATCCACTACTCCTCCACTTCCATGTCCATCTTCTACCAAGGTTCTCTTCTCGGCTCGGCTCAGGTTCAAGCCGGCTCCCAGCCGCCCCGCTCCTGCCAGCTCCTCCGCCTCCCCGCACGCCTCCACGCGCTCGAGCTCGCTCACCACGCCACGCGCTTCCTCCACGACGTCGCGCGCCGCGAGATGTTCCTCGACGCCGCGGTTGATATCGCCGGCACCGCCAGGGTCATGTGGTGGGACCATAACTTCAAGGTCCACGTGGACAGCCACGTCACCGTCGATCCCGTGTTTCTCGACGTCATTGATCAGGAAAACACCTCCGAGCTTGAAGTATTCACCGCAGCGGCGTTGGGGAGTGAGCAATGA 576 0.5729 MDNKKSKWSWSSAIIGAASAVAASALISAKPKDPTFHLISINFTSLKLNFPLLDAEVLLTVHVTNPNIAPIHYSSTSMSIFYQGSLLGSAQVQAGSQPPRSCQLLRLPARLHALELAHHATRFLHDVARREMFLDAAVDIAGTARVMWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELEVFTAAALGSEQ* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1378 191 Gene3D - 15 166 - -
Gso11g1378 191 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 4 171 - -
Gso11g1378 191 SUPERFAMILY LEA14-like 23 162 - -
Gso11g1378 191 SMART why 41 156 IPR013990 GO:0009269
Gso11g1378 191 Pfam Late embryogenesis abundant protein 60 157 IPR004864 -
Gso11g1378 191 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 4 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1378 Gso-Chr11 15718001 15721438 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1378 - - gmx:100782945 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1378 11 15718001 15721438 Gso11g1378 11 15718001 15721438 ECH