Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1376 ATGGATCCATTCGGTCCGAACCGATTCCCGAACCGAAAACTCTCCGCCACGGAACGCTTCCTCGGCGTTCCATTTCACGCGCCGCCGCACTTCTCAAACTCCGCCGCCTCCTCCAACGACGAGCTCCTCGAGGACGACGTCGTTTTCTTCGGCGGCGACTACGGCGCCGAACACAACCACCACAGCGCCTCCACTCCTTCCTCTTCCTTGTCATTGTCTTCCTCCGCCACTCCGAACAACAACCTCCACAACCATTCCCACGGCATCCTCGCCGCGCTCCCCGAGAACGAAACCTCGCACAACCTCCGAAACGTTTCGCAGCACTTCCACAAGGCATCAATCTCTTCAATCTCGTCCGCCTCCTCTTCATCCTCCTCCTCGCGCGTCATTCCCGCCATCCCGCGGCCTCCGCCGCCGGCGCAACCTTCGTCCGTCATGTTCCACCAGTCTGCGCCGGTGAAAGTCCCAATCCTGTCGATGAAGGCGCGGCGGAGATACCGCGACGTCGATGACGACGACGAAGACGGCGACGAGGACGACGAAGAGGAGATGGTGCCTCCGCACGAATTCGTAGCGAGAAACTCAGCGCAATCTCCGATGCTCGCTTATTCGGTTCTGGAAGGGATAGGGAGAACGCTGAAAGGGAGGGATATGCGTCAGGTTCGAAATGCCGTTTGGCGCCAAACAGGTTTCCTCGGTTGA 702 0.5969 MDPFGPNRFPNRKLSATERFLGVPFHAPPHFSNSAASSNDELLEDDVVFFGGDYGAEHNHHSASTPSSSLSLSSSATPNNNLHNHSHGILAALPENETSHNLRNVSQHFHKASISSISSASSSSSSSRVIPAIPRPPPPAQPSSVMFHQSAPVKVPILSMKARRRYRDVDDDDEDGDEDDEEEMVPPHEFVARNSAQSPMLAYSVLEGIGRTLKGRDMRQVRNAVWRQTGFLG* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1376 233 MobiDBLite consensus disorder prediction 59 83 - -
Gso11g1376 233 MobiDBLite consensus disorder prediction 116 144 - -
Gso11g1376 233 PANTHER - 4 232 - -
Gso11g1376 233 MobiDBLite consensus disorder prediction 116 130 - -
Gso11g1376 233 MobiDBLite consensus disorder prediction 164 184 - -
Gso11g1376 233 MobiDBLite consensus disorder prediction 60 83 - -
Gso11g1376 233 PANTHER EXPRESSED PROTEIN 4 232 - -
Gso11g1376 233 Pfam Senescence regulator 41 232 IPR007608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1376 Gso-Chr11 15694936 15695865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1376 - - gmx:100779194 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0741 12 7466071 7466787 Gso11g1376 11 15694936 15695865 GST
Gso12g1565 12 39110466 39111569 Gso11g1376 11 15694936 15695865 PCT
Gso11g3284 11 48670289 48671325 Gso11g1376 11 15694936 15695865 PCT
Gso11g1376 11 15694936 15695865 Gso12g1565 12 39110466 39111569 PCT
Gso11g1376 11 15694936 15695865 Gso11g3284 11 48670289 48671325 PCT