Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1345 ATGGAAAAAGATGGAAAGAGAGTGGTGATCCTAGGAGGTGGCGTTGCGGGATCCGTCGTGGCTAAATCTCTTCAATTCCATGCCCATGTCACACTCGTTGATCCGAAGGAATATTTTGAGATTACATGGGCAAGTTTGAGGTGTATGGTTGAGCCATCTTTTGCAGAGAGATCACTGATCAATCACAGAGATTACTTAACCAATGGCGACATCATTACGTCCAATGCCGTCAATGTTACAGAAACTGAAGTTTTGACTGCAGATGGCCATCGAATTGGCTATGACTATCTTGTTATTGCCACTGGTCATGCAGATCCTCTCCCCAAAAGTAGGAGGGAAAGACTTAATCAGTTCAAAGAAGACAATCAAGAGATAAAATCTGCTCAGTCCATTCTGATTATTGGAGGAGGTCCCACTGGTGTGGAACTTGCTGGAGAGATAGCTGTTGATTTTCCGGATAAGAAGCTTACACTAGTGCACAAAGGAGCAAGGCTTCTGGAATTCGTAGGGGCAAAAGCCGGGGATAAGACTCTAAATTGGTTGAAATCAAAGAATGTTGTGGTGAAGCTAGAGCAATCAGTTGACATGAACGCATTCACAGATGGACAGAAGATATATCAAACTTCAAATGGAGAGACCATTGAGGCAGATTGTCATTTCTTATGTATAGGGAAACCACTTGCTTCAGCATGGCTTAAGGAAACTGTGTTGAAGAATGACTTGGATGGTCAAGGTAGGATCAAGGTAGATGAAAGATTGAGGGTCAAGGGCCGGAACAACATTTTTGCAATTGGAGATATTACAGACATTCCAGAAATCAAGCAAGGGTTTTTGGCACAGCAGCAGGCTGAAGTGGTTGTGAAGAACTTGAAGGTGACAATAGAGGGAGGAAGAGAATGTAGGATGGAAACTTACAAGCCACATTCAGCAATAGCAATAGTTTCACTCGGGAGGAAAGATGCTGTAGCACAGTTACCATTCTTGACAATCAGTGGAAGAATTCCAGGATTCATCAAGTCTGGAGATTTGTTTGTTGGTAAAACAAGAAAACAAATGGGACTCAATCCTGTACAAGCTTGA 1080 0.4269 MEKDGKRVVILGGGVAGSVVAKSLQFHAHVTLVDPKEYFEITWASLRCMVEPSFAERSLINHRDYLTNGDIITSNAVNVTETEVLTADGHRIGYDYLVIATGHADPLPKSRRERLNQFKEDNQEIKSAQSILIIGGGPTGVELAGEIAVDFPDKKLTLVHKGARLLEFVGAKAGDKTLNWLKSKNVVVKLEQSVDMNAFTDGQKIYQTSNGETIEADCHFLCIGKPLASAWLKETVLKNDLDGQGRIKVDERLRVKGRNNIFAIGDITDIPEIKQGFLAQQQAEVVVKNLKVTIEGGRECRMETYKPHSAIAIVSLGRKDAVAQLPFLTISGRIPGFIKSGDLFVGKTRKQMGLNPVQA* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1345 359 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 5 356 - -
Gso11g1345 359 Gene3D - 4 350 - -
Gso11g1345 359 SUPERFAMILY FAD/NAD(P)-binding domain 3 286 IPR036188 -
Gso11g1345 359 Pfam Pyridine nucleotide-disulphide oxidoreductase 6 274 IPR023753 GO:0016491
Gso11g1345 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 8 27 - -
Gso11g1345 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 130 148 - -
Gso11g1345 359 PRINTS FAD-dependent pyridine nucleotide reductase signature 246 268 - -
Gso11g1345 359 PANTHER APOPTOSIS-INDUCING FACTOR 1 5 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1345 Gso-Chr11 15147442 15150568 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1345 8 274 EF-hand Containing Proteins AT4G28220 22.093 2.64e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1345 K22745 - gmx:100818210 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1345 11 15147442 15150568 Gso11g1345 11 15147442 15150568 ECH
Gso12g0767 12 7732058 7734881 Gso11g1345 11 15147442 15150568 GST