Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1344 ATGGCGGAGAAGAAAGTGGTGATCCTAGGAGGTGGTGTTGCCGGTGCCAACCTTGCAAAAACTATACAACATCAAGCCAACGTCACCCTTATTGATCCGAAGGAATATTTTGAGATTCCATGGGCAAGTTTGAGGGGATTGGTTGAGCCAACTTTTGCTGAAAGGATAGTAATCAACCATAGAGAGTACTTCAAAAAGGGTAACCTTGTTGTATCCAGTGCTGTCAACATAACTGAAACTGCAGTGGTGACTGAAGATGGCCAGCAGATTGCCTATGACTATCTTGTTATTGCCACTGGACACACAGAACCAATCCCCAAAACCAGGAGTGAAAGACTTGACCAATACAAAGGAGAAAATGCAAAGATCAAATCTGCAAGTTCAGTTTTGATTGTTGGGGGAGGTCCAACTGGTGTTGAGCTTGCAGCAGAGATTGCTGTTGATTTTCCTGATAAGAAGGTCACCATAGTGCATAAAGGAACGAGGTTGCTTGAATACATTGGGACAAAAGCTTCAAGCAAGACTTTAAAGTGGCTCAAATCAAAGAAAATTGATGTGAAACTAGAACAATCGGTCGATTTGAGCTCCTCTTCTGAAGAAAATAAGACATATCAAACTTCAAATGGAGAGACTATAAAAGCAGATCTTCATTTTCTATGCACAGGGAAACCACTTGGTTCAACATGGATTAGAGAAACTCTTCTAAAGAATGACTTGGATGCTGATGGAAGGATCAAGGTCGATGAGCACTTGAGAGTGAAGGGCAAGAGCAACATTTTTGCAATTGGAGATATTACAGATGTTCAAGAAATCAAACAAGGGATGTATGCAAGTGCTCATGCTCAAGTGGTTGCCAAGAACCTGAAGCTATTGATAGAGGGAGGAGGCAAAGAGCGTAAGTTGGGAACATACAAGGCACAGCCACCAATATCTATAGTTTCACTTGGAAGGAAAATAGCTGTTGCACAGTTCCCATTCATGACTGTGCTTGGAAGGCTTCCTGGCATGATCAAGTCAGGGGATTTGTTTGTTGGGAAAACCAGAAAGGAATTAGGACTCGAACCTAATGTTAAAAAATCTTAA 1083 0.4174 MAEKKVVILGGGVAGANLAKTIQHQANVTLIDPKEYFEIPWASLRGLVEPTFAERIVINHREYFKKGNLVVSSAVNITETAVVTEDGQQIAYDYLVIATGHTEPIPKTRSERLDQYKGENAKIKSASSVLIVGGGPTGVELAAEIAVDFPDKKVTIVHKGTRLLEYIGTKASSKTLKWLKSKKIDVKLEQSVDLSSSSEENKTYQTSNGETIKADLHFLCTGKPLGSTWIRETLLKNDLDADGRIKVDEHLRVKGKSNIFAIGDITDVQEIKQGMYASAHAQVVAKNLKLLIEGGGKERKLGTYKAQPPISIVSLGRKIAVAQFPFMTVLGRLPGMIKSGDLFVGKTRKELGLEPNVKKS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1344 360 Gene3D - 1 346 - -
Gso11g1344 360 SUPERFAMILY FAD/NAD(P)-binding domain 1 288 IPR036188 -
Gso11g1344 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Gso11g1344 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 92 110 - -
Gso11g1344 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 128 146 - -
Gso11g1344 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 244 266 - -
Gso11g1344 360 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 1 360 - -
Gso11g1344 360 Pfam Pyridine nucleotide-disulphide oxidoreductase 4 279 IPR023753 GO:0016491
Gso11g1344 360 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1344 Gso-Chr11 15141196 15144583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1344 6 272 EF-hand Containing Proteins AT4G28220 24.625 5.10e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1344 K22745 - gmx:100817682 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0768 12 7741467 7748147 Gso11g1344 11 15141196 15144583 GST