Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1269 ATGAAGATGATATCTCTCTTGTCATTTTCACTAGCACTTCTAGTTTCACTTTTGTATTCCACCACCACTTTAGCCCAATTATCACCAGCGGCCGCCCCTCTCAAACCACCCCAACCTACCCCTACCCCACCAGCTGCGGCTCCTCAACAACCATTGGTTCCCTCATTGCCACAATCACCAAGTGATGCCACCCCGGACACTGCAGCTGTTGACATTGTTGGAATCCTGAGGAAGGCAAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCTCAGCTTCTAACTACTAAATCAGGCGGCATAACAATTCTTTCACCCGATGACAGTGCTTTCTCAGAACTCAAAGTAGGCTTCCTCAACTCTCTCTCTGATGGCCAAAAGCTAGAACTCTTGCAATTCCACGTTCTTTCAGACTATGTCTCTAGCTCCAACTTTGACACTCTGACGAACCCTGTGAGAACACTTGCAGGGGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGTTACGGAGGGAGTGTGAACATCTCGACGGGTGAGGTTAACACCACCATCACTGGCATTATATATACCGATAAACATCTTGCTATATATAAGGTGGGTAAGGTGCTTCTTCCTATGGACTTCTTTGCTGTTGCTAAGGCACCTGCAAAAGCACCCTCTTTGGCTCCAGAACCTTCAAGTGATGCGGCAAAGGCACCTAAAGCTGATAAGGATGAGTCATCATCTTCAGATGCATCGCAGGTTAATCCCACTGAACAGAACTCTGGCATCGAGAAGATCAGTGTGTACGGAATGTGGGTGTCCCTTGTTTTTGGACTGGTTCTCCTGATTGCATTTTCATAG 873 0.4662 MKMISLLSFSLALLVSLLYSTTTLAQLSPAAAPLKPPQPTPTPPAAAPQQPLVPSLPQSPSDATPDTAAVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILSPDDSAFSELKVGFLNSLSDGQKLELLQFHVLSDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKAPSLAPEPSSDAAKAPKADKDESSSSDASQVNPTEQNSGIEKISVYGMWVSLVFGLVLLIAFS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1269 290 ProSiteProfiles FAS1/BIgH3 domain profile. 69 213 IPR000782 -
Gso11g1269 290 MobiDBLite consensus disorder prediction 228 262 - -
Gso11g1269 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 281 - -
Gso11g1269 290 MobiDBLite consensus disorder prediction 32 55 - -
Gso11g1269 290 SUPERFAMILY FAS1 domain 65 216 IPR036378 -
Gso11g1269 290 Gene3D FAS1 domain 54 215 IPR036378 -
Gso11g1269 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 281 IPR045003 -
Gso11g1269 290 MobiDBLite consensus disorder prediction 30 65 - -
Gso11g1269 290 SMART fasc_3 111 216 IPR000782 -
Gso11g1269 290 Pfam Fasciclin domain 81 215 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1269 Gso-Chr11 11755066 11756691 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1269 - - gmx:100796367 411.764