Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1268 ATGATGATGCAACATTCTCTCATCTTCTGTGCCTCACTTGTACTTGTGATGATCACCACATCAGCCCAACACTCACCAGCAGCATCTCCAACAATACCAAAATTGCCACAATCACCCTTGGCATCTCCACAGGGAATGAATACTGTTCCATTGGTACCAGTGTCTCCCATTGGTGCCCCTACACCCGCCACTTCAAAAGCTCCCACCATTGACATTGCTCAAATCCTGAGTAAGGCCAAGAGATTTTCTGTTCTGATTCGGCTTCTGAAGACGACCCAGTTGATCAACCAACTCAACTCTCAACTCCTCACGTCAGGTTCTGGGGGATTGACCATTTTCTCCCCACCTGATTCTGCCTTCTCAAAGCTAAAAGCAGGATTCCTCAACTCACTCAACGACAGGCAAAAGGTTGAACTTTTACAATTTCACACTCTTTCTTCCTTCCTCTCAATCTCCAACTTCGACACTCTCACCAACCCCGTTCAGACCCAAGCCGGTGATGACTCTAAAAGGCTGCAACTTAATGTCACCACTTATGGTGGCAGCCAAGTGAGCATGACCACCGGTGCCGTCAATGCCACCATTACCGGAACCGTGTACACGGACAACAAGCTTGCCGTTTATGAGGTGGACAAGGTGCTTGTGCCACTTGACGTGGTTCTTCCTAAGCCTAAGGCTCCGGCACCTTCACCGTCGAAAGGAGAATCACCTAAAACGAAGTCATCTGCAGATGAAAGTGGTGATAGTAACAAAAATAGTGATGATGATGGTGCTGTTCCAGTGGACGCTTCTGCTGGTTCCATGAATTTCAACAGCGTACATGTAACGCGGATGTCTTTCGTTGTCGGGTTTGTTCTGATGGTTGGATCCATGATATGA 879 0.4778 MMMQHSLIFCASLVLVMITTSAQHSPAASPTIPKLPQSPLASPQGMNTVPLVPVSPIGAPTPATSKAPTIDIAQILSKAKRFSVLIRLLKTTQLINQLNSQLLTSGSGGLTIFSPPDSAFSKLKAGFLNSLNDRQKVELLQFHTLSSFLSISNFDTLTNPVQTQAGDDSKRLQLNVTTYGGSQVSMTTGAVNATITGTVYTDNKLAVYEVDKVLVPLDVVLPKPKAPAPSPSKGESPKTKSSADESGDSNKNSDDDGAVPVDASAGSMNFNSVHVTRMSFVVGFVLMVGSMI* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1268 292 SMART fasc_3 111 217 IPR000782 -
Gso11g1268 292 MobiDBLite consensus disorder prediction 238 252 - -
Gso11g1268 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 38 287 IPR045003 -
Gso11g1268 292 MobiDBLite consensus disorder prediction 221 260 - -
Gso11g1268 292 Pfam Fasciclin domain 81 216 IPR000782 -
Gso11g1268 292 SUPERFAMILY FAS1 domain 58 217 IPR036378 -
Gso11g1268 292 Gene3D FAS1 domain 69 216 IPR036378 -
Gso11g1268 292 ProSiteProfiles FAS1/BIgH3 domain profile. 69 214 IPR000782 -
Gso11g1268 292 PANTHER FASCICLIN DOMAIN PROTEIN 38 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1268 Gso-Chr11 11749789 11751127 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1268 - - gmx:100819829 526.939