Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1206 ATGTCGGTGAGTTCGAGTTCCAGGGGAAGAATAACGACGGAGCTTCAAGTCCCGAAGAAATGGACAGACAGAGAAACAAGTCCTGAGAGAACCAAGGTTTGGGCCGAGCCAAAGACCAAAACGGCAAAAAAAGTCTCCGTCGTTTACTACCTCTCCCGAAACGGCCAACTCGAGCACCCTCACTTCATGGAAGTTCCTCTCTCTTCGCCTCACGGTCTCTACCTCAAAGACGTTATCAACCGCTTGAACGCCCTCCGGGGCAAAGCCATGGCCACCTTGTACTCTTGGTCCGCCAAACGGGGCTACAAAAACGGCTTCGTTTGGCATGATTTGTCGGAGAACGACTTCATCCACCCGACGCAAGGACAAGACTACATTCTCAAAGGATCGGAGATTGTTGAGCACGGTGTAGCCGCCGTCGCCGCTAGGGTTAACAAATCGGAGGAAGAGTCCAATTCGCCGGTGGCGATCACGAGACGGCGAAACCAGTCGTGGAGCTCTATTGATATGAATGAGTACCGAGTTTATAAGTCCGAATCTTTCGGTGGCTCGGCTGAGAGAATCGGCGCCGACGCGGCGACTCAGACGGAGGAGAAGCTGAGGCGGAGGAGGGCGGCGAGGGAGGAAGAAGTGGTGGAGATTCAAGAGAAGAATGATAGAAGAATTGAAGCGGGAATGGAGGGAGAGAGGGTCCCGCACGTGACTTGTGATGATAATGATAGTAATAACCACACTACGGAGCTGAGTAGGGACGAGATCTCTCCTCCACCGTCGGATTCGAGCCCCGAGACGCTGGAGACGCTGATGAACGCGGATGGACGGCTCGGACTGCGGTCTTCGGAATCCCAGAAGGACAATCTGACGGTGGAGAGCTGTCCTAGTGGGAGGATGAGAGCTTCGTCTGTTTTGTTGCAATTATTATCGTGCGGTGCGGTGTCGTTTAAGGAGTGTGGAGCCAACGCAGTGAAGGATCGAGGGTTCTCATTGGTTGGGCATTACAAGTCCAGGATGCCCCGCGGAGCAGGGAATCATTCGGGAAAGGAAACGGGGACATCGATGGAAATTCCAGATTTGAGCAGGGTGAGGTTGGAAGATAAAGAATATTTTAGTGGGAGCTTGATCGAGACCAAGAAAGTGGAAACCCCTGCTTTGAAGAGGTCCTCTTCTTACAATGCAGATAGTGGTTCCCGGTTGCAAATAGTGGAGCATGAAGAAGATGTAGTGCGGGCAAAGTGCATACCACGGAAGTCGAAGACACTACCAACCAAAAAAGAAGAAGGTGCTTCCATGCATATTGTTAGCAGTAGCAGACATGGGAGCAAAAGATTTGACCCACAACAATAA 1344 0.5186 MSVSSSSRGRITTELQVPKKWTDRETSPERTKVWAEPKTKTAKKVSVVYYLSRNGQLEHPHFMEVPLSSPHGLYLKDVINRLNALRGKAMATLYSWSAKRGYKNGFVWHDLSENDFIHPTQGQDYILKGSEIVEHGVAAVAARVNKSEEESNSPVAITRRRNQSWSSIDMNEYRVYKSESFGGSAERIGADAATQTEEKLRRRRAAREEEVVEIQEKNDRRIEAGMEGERVPHVTCDDNDSNNHTTELSRDEISPPPSDSSPETLETLMNADGRLGLRSSESQKDNLTVESCPSGRMRASSVLLQLLSCGAVSFKECGANAVKDRGFSLVGHYKSRMPRGAGNHSGKETGTSMEIPDLSRVRLEDKEYFSGSLIETKKVETPALKRSSSYNADSGSRLQIVEHEEDVVRAKCIPRKSKTLPTKKEEGASMHIVSSSRHGSKRFDPQQ* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1206 447 MobiDBLite consensus disorder prediction 192 237 - -
Gso11g1206 447 MobiDBLite consensus disorder prediction 192 265 - -
Gso11g1206 447 MobiDBLite consensus disorder prediction 417 447 - -
Gso11g1206 447 MobiDBLite consensus disorder prediction 433 447 - -
Gso11g1206 447 PIRSF UCP031043 12 437 IPR021182 -
Gso11g1206 447 PANTHER OS01G0839200 PROTEIN 11 417 - -
Gso11g1206 447 MobiDBLite consensus disorder prediction 1 28 - -
Gso11g1206 447 Pfam Protein SOSEKI, plant 45 394 IPR010369 -
Gso11g1206 447 MobiDBLite consensus disorder prediction 238 265 - -
Gso11g1206 447 Coils Coil 190 217 - -
Gso11g1206 447 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 11 417 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1206 Gso-Chr11 10891060 10894883 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1206 - - gmx:100803283 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1206 11 10891060 10894883 Gso11g1206 11 10891060 10894883 ECH
Gso12g0660 12 6423994 6428011 Gso11g1206 11 10891060 10894883 GST