Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1156 ATGGCATCAACTACTCTCTTCAGCTTCAGACTCTCTTTGAACCCACTGCACCATCAACAGACAACGAGGCCAAAATCTCTGCTCTCCTCTCCTCGCACCAATCCACGCCTCGTTTCTTCCATTAACAATCATTTGGCCCTCACACGTGTCACATACCCGCTTCTCCAATCTCACTCTGCTCCTAAGCGCAGATTCCATGTGTATTCTGATGGGGAAAGCTCCGAGTCGCTTGTTTCTGACGCTACATACCAAGAGGAATTTTCTTGGTCTTCTGTAATTCTTCCGTTTCTGTTCCCTGCGTTGGGTGGCTTATTATTTGGCTATGATATTGGAGCCACCTCTGGCGCTACAATTTCACTGCAGTCACCTGAGCTTAGCGGTATATCATGGTTTAAACTTTCTGCTATTCAGCTTGGACTAGTGGTTAGTGGTTCCCTATATGGGGCTCTTCTTGGCTCGCTTGTTGCATTTGCCATAGCTGATTTCCTTGGGAGGAAGAAACAACTCATTACTGCAGCACTGTTGTATTTGTTTGGTGGTGTGATTACTGCCTATGCACCAGAACTTGGTGTTCTCTTAGCAGGAAGGCTGCTTTATGGACTTGGTATAGGTTTGGCCATGCATGGGGCTCCTTTATATATTGCGGAGACTTGTCCATCACAAATCCGTGGGACTTTAGTATCATTAAAAGAACTCTTCATTGTCCTGGGGATTCTGCTGGGTTATTTTGTGGGAAGCTTTCTGATTGAGACCGTTGGGGGATGGCGGTTCATGTATGGATTTAGTGCTCCAGTTGCTGTATTAATGGGGCTTGGAATGTTGACTCTCCCCAATTCTCCACGGTGGTTGCTTCTCAGAGCAGTGCAAGGAAAAGGTTCTTTTCAAGATTTGAAGGAAAAGGCCATTTTTTCCCTGAGCAAATTAAGGGGCCGACCACCTGGTGACAAAGAATCCGAGAGACAAGTAGAAGAAACCCTTGTCTCATTGAAGTCTGCCTATGCAGATAAGGAATCGGAGGGGAATTTCTTAGAGGTGTTTCAGGGTCCGAATCTGAAAGCTTTCATAATTGGTGGGGGACTAGTCTTATTTCAACAGATAACAGGTCAACCAAGTGTTCTGTACTATGCAGGTCCAATTCTTCAGAGTGCTGGATTTTCTGCTGCATCCGATGCTACAAAAGTTTCGGTTGTTATTGGCCTATTCAAGTTGCTAATGACTTGGATTGCTGTCCTAAAAGTTGATGATTTGGGGAGAAGACCTCTGCTGATTGGAGGTGTCAGTGGCATTGCCCTTTCTCTAGTTCTCCTTTCTGCTTATTATAAATTTCTTGGAGGTTTCCCACTTGTTGCTGTTGGAGCTTTACTTCTTTATGTTGGTTGCTACCAGATATCATTTGGGCCGATAAGTTGGCTAATGGTATCAGAGGTCTTCCCACTTCGCACTAGAGGAAAGGGGATTAGTCTGGCTGTTCTTACCAACTTCGCTTCAAATGCTGTTGTCACCTTTGCATTCTCCCCGCTAAAGGAGTTTCTAGGAGCAGAAAATCTTTTTCTCCTTTTTGGGGCTATTGCTATTCTATCACTTTTGTTCATTATCTTTTCTGTCCCAGAGACAAAAGGCTTGAGTTTAGAAGATATAGAATCCAAAATCTTGAAGTGA 1659 0.4442 MASTTLFSFRLSLNPLHHQQTTRPKSLLSSPRTNPRLVSSINNHLALTRVTYPLLQSHSAPKRRFHVYSDGESSESLVSDATYQEEFSWSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGISWFKLSAIQLGLVVSGSLYGALLGSLVAFAIADFLGRKKQLITAALLYLFGGVITAYAPELGVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFLIETVGGWRFMYGFSAPVAVLMGLGMLTLPNSPRWLLLRAVQGKGSFQDLKEKAIFSLSKLRGRPPGDKESERQVEETLVSLKSAYADKESEGNFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAASDATKVSVVIGLFKLLMTWIAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGFPLVAVGALLLYVGCYQISFGPISWLMVSEVFPLRTRGKGISLAVLTNFASNAVVTFAFSPLKEFLGAENLFLLFGAIAILSLLFIIFSVPETKGLSLEDIESKILK* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1156 552 ProSitePatterns Sugar transport proteins signature 2. 198 223 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso11g1156 552 Gene3D MFS general substrate transporter like domains 86 550 IPR036259 -
Gso11g1156 552 Pfam Sugar (and other) transporter 98 547 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso11g1156 552 SUPERFAMILY MFS general substrate transporter 86 547 IPR036259 -
Gso11g1156 552 TIGRFAM SP: MFS transporter, sugar porter (SP) family 88 546 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g1156 552 CDD MFS_GLUT10_12_Class3_like 98 546 - -
Gso11g1156 552 ProSitePatterns Sugar transport proteins signature 1. 156 173 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso11g1156 552 PRINTS Sugar transporter signature 103 113 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g1156 552 PRINTS Sugar transporter signature 193 212 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g1156 552 PRINTS Sugar transporter signature 364 374 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g1156 552 PRINTS Sugar transporter signature 451 472 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g1156 552 PRINTS Sugar transporter signature 474 486 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g1156 552 ProSiteProfiles Major facilitator superfamily (MFS) profile. 95 539 IPR020846 GO:0022857
Gso11g1156 552 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 40 552 - -
Gso11g1156 552 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 40 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1156 Gso-Chr11 10366966 10370543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1156 17 552 Organic Solute Cotransporters AT5G59250 72.578 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1156 - - gmx:100800071 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1156 11 10366966 10370543 Gso11g1156 11 10366966 10370543 ECH
Gso12g0495 12 4385589 4389769 Gso11g1156 11 10366966 10370543 GST