Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1140 ATGTCAATTGTTCCAATCAACCAGGGTGATGCCAACGGCTCCAACCCCTTCGCTTCGTGGGGTCAATTCGTGGATTTTCCTCTCCCTCCTTCCATCTCCGGCTTCTTCCCCGGCTTGGAATTCGGATTCGGATTCGGATCATCCGTGAACACACGTGTGGACTGGAGGGAGACTCCCAGAGCGCACGTGTGGAAGCTGGTGCTTCCCGGCTTCTCCAACGAGGACGTGCTGGTTGAGCTCCAAGACGAGAGGGTGCTCCAAGTCAGCGTGGAGAGCGGCAACTTCGTCACGAGGTTTAAGGTCCCCGACAACGGTAACCTAGAACAACTCAAAGCCAACATGCGTCACGGGGTTCTCGTTGTCACTGTTCCCAAGTTTCATCAACCCACTACTACTGCCCCTGCCAATAGGAATGTCAGGGAAGTTGAAATTGAAGGCACCGACTGA 447 0.5459 MSIVPINQGDANGSNPFASWGQFVDFPLPPSISGFFPGLEFGFGFGSSVNTRVDWRETPRAHVWKLVLPGFSNEDVLVELQDERVLQVSVESGNFVTRFKVPDNGNLEQLKANMRHGVLVVTVPKFHQPTTTAPANRNVREVEIEGTD* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1140 148 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 44 145 IPR002068 -
Gso11g1140 148 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 147 - -
Gso11g1140 148 SUPERFAMILY HSP20-like chaperones 26 129 IPR008978 -
Gso11g1140 148 Gene3D - 32 146 IPR008978 -
Gso11g1140 148 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 147 - -
Gso11g1140 148 Pfam Hsp20/alpha crystallin family 54 144 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1140 Gso-Chr11 10270879 10271703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1140 K13993 - gmx:100797426 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0481 12 4291106 4291883 Gso11g1140 11 10270879 10271703 GST