Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1114 ATGGAGAAATACTTGGTTTCGCATAAACCCCCAATTGAAAAAGTTCAGCCTCATCGTCGTAGTTGGAGGTGCCAATGGAAGAGGGGCTCGGTTGAACTAAATGGGAGATTTGAGCGTAATTATCGTCATGAGATGCTGGATCTGCTAATTCGATCGTATTCTGAGGTTGCAGCGTTTCCGCATTTGTATCAAGTGGATGGGGCGCCATGCCAATCTCATACGAATCGATTGATTGGTGAGGCAAATGGTGATGGCCATCTTCCATTTAGAAAGCAAGGCATCTCTGCAGTAGATTTTGACAACAAGGGAATATACTTGGTGTCTGTGACAAAATCAGGTTGCTTAACAGTTCACGACTTCGAAGCTCTTTATTGCCAGATACCTGAATTAACTTGCTTGAAAGAAGATGAAAGCAAGCATTTAATGCATCTCTCACTAAATCAACAACTTGATGCTGTCAGATGGAATCCTCTTAATCAGGATGAGGTTGTTTGTGCATCTGTAAAAAGTAACAAACTACTCATATTCGACGTTGGATATGTCTCATCAGATCCAGTTGAAGTGTTAAGAACAAGACAAACAACCACGGTTAATGGATCCAGCATACACAAAGGTCTCTCTGATGTAGCTTTTACAAAAAATGACACAAGGATACTTGCTTCTGATACACATGGTGCAATTAATGTCTGGGACAGAAGAGTGAATACTCTACCTTGCCTTGAGCTTGCATCTGCTTCATGTGGTACGCTTAACAGCATCCAATTAAATGCAGATAATCAGATTATTTTTGGTGCTGGGAAACACGGGCTTGTGTATGTATGGGATATTCGTGGTGGAAGAGCATCTGCTACTTTTCAAAGTCTCAAAGAGATATGCCATCCACCTGTAACATCAGTGAAGTTGGCAACATTGCTAGAGAAGATTGGATCTTTGAAGGCACAGGCAAATATTGTTCCCAAGGAGATTCACTCTATTGATATTGATCCATCATGCCCATATCAGTTAGCTTTCCATCTTGTGGATGGCTGGTCAGGCGTTTTGGATACTAATAATTTTCAAGTTACGCATATTCATTGCCCACCCCCAGCTTGGTTAAACGATTCCTACATTCCCGCTGATCTATCATATTTAAGAAAACCTTCATGGCTATCGACGGGTTCGATCTATTTAATTGGGTCATCATCTGATTGTGGCATTCATCTCTTGGATTTCTATCCCAGCACCAACTCACCAAGTCATGTGGATTACAAGGAGGATATGCAAGAAAATTCAAGGCGGCACAACCGAAGCAATCAGAACAGATTTATTTCTTTATCTGAAGGAGTTATCTCATGTGCTGCTCACCCTTTGTATAATGCCATCGTAGCAGGAACTAAGAAAACTTCTTTGCTCGTGATTTCCCAAAGACAAGAGTCATGCAGAAGTGACGATTAG 1434 0.4135 MEKYLVSHKPPIEKVQPHRRSWRCQWKRGSVELNGRFERNYRHEMLDLLIRSYSEVAAFPHLYQVDGAPCQSHTNRLIGEANGDGHLPFRKQGISAVDFDNKGIYLVSVTKSGCLTVHDFEALYCQIPELTCLKEDESKHLMHLSLNQQLDAVRWNPLNQDEVVCASVKSNKLLIFDVGYVSSDPVEVLRTRQTTTVNGSSIHKGLSDVAFTKNDTRILASDTHGAINVWDRRVNTLPCLELASASCGTLNSIQLNADNQIIFGAGKHGLVYVWDIRGGRASATFQSLKEICHPPVTSVKLATLLEKIGSLKAQANIVPKEIHSIDIDPSCPYQLAFHLVDGWSGVLDTNNFQVTHIHCPPPAWLNDSYIPADLSYLRKPSWLSTGSIYLIGSSSDCGIHLLDFYPSTNSPSHVDYKEDMQENSRRHNRSNQNRFISLSEGVISCAAHPLYNAIVAGTKKTSLLVISQRQESCRSDD* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1114 477 Gene3D - 82 474 IPR015943 GO:0005515
Gso11g1114 477 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 476 - -
Gso11g1114 477 ProSiteProfiles Trp-Asp (WD) repeats profile. 243 284 IPR001680 GO:0005515
Gso11g1114 477 PANTHER WD40 REPEAT PROTEIN 12, 37 1 476 - -
Gso11g1114 477 SUPERFAMILY WD40 repeat-like 90 460 IPR036322 GO:0005515
Gso11g1114 477 SMART WD40_4 236 275 IPR001680 GO:0005515
Gso11g1114 477 SMART WD40_4 74 119 IPR001680 GO:0005515
Gso11g1114 477 SMART WD40_4 190 231 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1114 - - gmx:100780441 973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1114 11 9998501 10007752 Gso11g1114 11 9998501 10007752 ECH