Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1113 ATGGCTGCAACAACAGCAACCTCGGCACAGGTTTTCAAAGACTACAAGGACAGCAACAATGGCAACCCTGAAATTACGAGGCATGAAATTCAAGCCGCCATAGCCAAAGCTGTGGAGCTAAGAGCTCTTCATGCGGCTTTAATGCGAGGAAATAGCCCTGCCAATGCTAGATTCCCATCCCCTTCCCCTGCTTCGCGCCCTGTTGCTCACTTCTCTGCTCAAGATTACCCTGTTTTCACTCCTAGCTACGAAGATGATCCACTGGTGGGGTACAATCAAAATTCCATGAAAAGCCTAACAGTATCAGAAAGTTGGGATGGGAGTATGCTAGAAGGAGGAAACAACATAGATAACATCGTAGCAGATTACAAGGAGAGATCAAGTTCAAGGAAGGGACTATATGCTGGTTTTGCCAACCTTGAATCTCACATATGCCCCACGGAAGACACCAAATCTGTGACTGGCTCTAGCGCAAATCAAATTACCGTTCTTCAAACATCGCCACCAAAAGACTACTTCAAGTGTAGGAGGCGAAACAGTATGGAGGATTTCAAGTCTGTATCTTCCTGCAACAAATGTAACCCTGCCACCTTAACTAGTGAATTTGAGAATGCAAGGAACAGCAAGAGCTCCAACATTGTTGTCCAGGTCACAGATTCCCGCTCATCTCTTCAATCACAAACTAAAAACAAGGGGGTGATTTCTTGGTTGTTTCCAAGGTTAAAGAAGAAGCACAAGAATGAGAATTCCCCTAATAGAGCAGAATCTGAGGATGTCTCTCAGGTGCTTAAGGACTTGGGAATAATGTCAATTGAGACACTGAAGAAAGAGCTGGTGGAAGCAAACGAAAACCGAGACATGGCCTTAATGGAAGTTTCTGAGATGAGGAATTCATTGGGGGAACTGAAACAGAAGCTGGAGTACTTGGAGAGTTACTGCAAAGAGCTGAAGAAAGCTTTGAAGCAAGCCGTGCAGCCAAGGGATTTTCAACTTTGTGACCAACTAAGTAGTCTTCCTCAGAGTAGGAAATCATTTGAAGGGAATGGAGAAAATTTGATGCCCGTGAGTGAAGAAGTAATGGTTGAGGGATTCTTGCAGATAGTATCAGAGTCTAGATTATCAGTGAAGCAGTTCTGTAAGACCCTTATAAACCACATTGAAGAAACTGATCATTCTTTGACAGAAAACTTGAATTTTCTTCTCCAACCATATAAGCTGTCACTGAATTCCAAGTACTCAAAGGCAGTTCTATACCATTTTGAAGCTTTTATAAACCAGTCTCTCTACCAAGACTTTGAGAATTGTGTTTTCCAAAAGAACGGTTGCTCAAAATTCCTTAACCCGCAGCAGGATCGTCAAACACAATTCTCCTCATTCGTTGCCCTTAGGAATTTGAGCTGGAACGAGGTACTGAGAAAGGGAACAAAATATTACAGTGAAGAGTTTAGCAAGTTCTGTGACCAGAAAATGTATTGTATCAACACTAGTCTGAAATGGACAAGGCCTTGGCCTGAACAGCTCCTTCAAGCTTTCTTTGTGGCTGCAAAATGCATGTGGCTGCTACATTTGCTTGCGTTTTCTTTCAATCCACCGTTGGGAATTTTAAGGGTCGAAGAGAATAAAACCTTTGATCCTCAATACATGGAAGATATGTGTCCGAGGTCACAAGGTCCAAGAAGAGTTAAGATCATGGTGATGCCAGGGTTTTATGTTCAGGATAGGGTCTTGAGGTGTAAAGTTCTCTGCAGGTACAAATCTGCGGCCTAG 1767 0.4307 MAATTATSAQVFKDYKDSNNGNPEITRHEIQAAIAKAVELRALHAALMRGNSPANARFPSPSPASRPVAHFSAQDYPVFTPSYEDDPLVGYNQNSMKSLTVSESWDGSMLEGGNNIDNIVADYKERSSSRKGLYAGFANLESHICPTEDTKSVTGSSANQITVLQTSPPKDYFKCRRRNSMEDFKSVSSCNKCNPATLTSEFENARNSKSSNIVVQVTDSRSSLQSQTKNKGVISWLFPRLKKKHKNENSPNRAESEDVSQVLKDLGIMSIETLKKELVEANENRDMALMEVSEMRNSLGELKQKLEYLESYCKELKKALKQAVQPRDFQLCDQLSSLPQSRKSFEGNGENLMPVSEEVMVEGFLQIVSESRLSVKQFCKTLINHIEETDHSLTENLNFLLQPYKLSLNSKYSKAVLYHFEAFINQSLYQDFENCVFQKNGCSKFLNPQQDRQTQFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMYCINTSLKWTRPWPEQLLQAFFVAAKCMWLLHLLAFSFNPPLGILRVEENKTFDPQYMEDMCPRSQGPRRVKIMVMPGFYVQDRVLRCKVLCRYKSAA* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1113 588 Coils Coil 271 291 - -
Gso11g1113 588 PANTHER - 1 588 - -
Gso11g1113 588 Coils Coil 299 319 - -
Gso11g1113 588 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 1 588 IPR042316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1113 Gso-Chr11 9985459 9988407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1113 - - gmx:100779911 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1113 11 9985459 9988407 Gso11g1113 11 9985459 9988407 ECH
Gso12g0458 12 4030661 4033506 Gso11g1113 11 9985459 9988407 GST
Gso15g0286 15 2604827 2607298 Gso11g1113 11 9985459 9988407 PCT
Gso11g3521 11 51043338 51045833 Gso11g1113 11 9985459 9988407 PCT
Gso11g1113 11 9985459 9988407 Gso15g0286 15 2604827 2607298 PCT
Gso11g1113 11 9985459 9988407 Gso11g3521 11 51043338 51045833 PCT