Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1042 ATGGAGGGCAAAGGTTTCACGGAAGAGCAAGAAGCTCTGGTGGTGAAATCATGGAACGAAATGAAGAAGAATTCTCAAGAACTCGGTCTTAAATTTTTCAAGAAAATATTGGAGATTGCTCCAGCAGCTCAGCAATTGTTCTCATTCTTGAAGGATTCAACTGTTCCTTTGGAGGAAAACCCCAAGCTCAAGCCCCATGCCATGGCTGTCTTTGTCATGACGTGTGAATCAGCTGTTCAACTGAGGAAAGCTGGTAAAGTCACTGTGAGGGAATCAAACTTGAAAAGATTAGGTGCTACTCATTTTAAAGCCGGTGTAGCAGCTGAGCATTTCGAGGTAACAAAGTTGGCACTATTGGAGACCATAAAAGAAGCAGTGCCTGAAATGTGGTCACCAGCCATGAAGAATGCATGGGAAGAAGCTCATGATCAGCTGGCCGAAGCCATCAAATCTGAAATGAAGCCCTCTGATTAG 474 0.4409 MEGKGFTEEQEALVVKSWNEMKKNSQELGLKFFKKILEIAPAAQQLFSFLKDSTVPLEENPKLKPHAMAVFVMTCESAVQLRKAGKVTVRESNLKRLGATHFKAGVAAEHFEVTKLALLETIKEAVPEMWSPAMKNAWEEAHDQLAEAIKSEMKPSD* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1042 157 Gene3D Globins 5 152 IPR012292 GO:0019825|GO:0020037
Gso11g1042 157 Pfam Globin 31 149 IPR000971 GO:0020037
Gso11g1042 157 PANTHER LEGHEMOGLOBIN-RELATED 3 155 IPR001032 GO:0019825|GO:0020037
Gso11g1042 157 CDD class1_nsHb-like 6 154 - -
Gso11g1042 157 PANTHER NON-SYMBIOTIC HEMOGLOBIN 3 155 - -
Gso11g1042 157 SUPERFAMILY Globin-like 5 154 IPR009050 -
Gso11g1042 157 ProSiteProfiles Globin family profile. 6 154 IPR000971 GO:0020037
Gso11g1042 157 ProSitePatterns Plant hemoglobins signature. 60 71 IPR019824 GO:0019825|GO:0020037
Gso11g1042 157 PRINTS Plant globin signature 7 24 - -
Gso11g1042 157 PRINTS Plant globin signature 32 52 - -
Gso11g1042 157 PRINTS Plant globin signature 60 88 - -
Gso11g1042 157 PRINTS Plant globin signature 125 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1042 Gso-Chr11 9317886 9319306 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1042 - - gmx:100809295 311.612