Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1039 ATGCATGAAATAAAGTGGCGCGATTCTGGTTCCAAGCAATTCAAGTTCATGGACCCAACAGTTTCAATTTCAAGTCACAAGCGCTCCAACAGTGACCCAATGAAGAGGAGAGTCATGGGAGATGGATTAGGGAGCATCAGTGAAGCTTCTTGTCAGCCTGAAGTGGATCCGGGGGAACTAAAGCAAAACATTGAATCCAAGAAGAGGCAATACCATAATATGGATCTTCAAAGTTCTTTGACTCAAGAGATTCTTCAGCTTCAAAAACGACTACAGCAACAATTCGTGATACGGCGCGCATTAGAGAAAGCATGTTATGTGCCTTTTTCACAGGATGCTACAATAGAAAATTCAATACCCAAGGCTGCAAAGGAACTGATTAAGGAAATTGGAATATTAGAATTAGAAGTTGTGCATTTGGAACAATACCTACTTTCTTTGTATCGGAAAAGATTTGATCAACAAATTTCAACTCTATCAACCAAGGAAAGAAGATTGGAATTAGCTTCAGACACTAATCAAGGAACATCCGCAGTGCCTGGAAATGATGCTATCTCTGACAAAGAAATTTCAGTTGTGCACTGTAGTAATGTCATTTCACCCAGAAATTCATCTGGGTTTAAGCTTAAGGAATGCAATAACCAGTTGGGAGCAGAAACTGGTTTAGACTCTAGTATTCATCGATGTCACTCCACACTATCTCAACGAACAACATGCTCAATTGAAGCTTCTCCTGGGAACATTGAGACCAAAGCTGTTGTTGACTCTTACCATTCTCTACCATTATCCATGTTGGAGCAAGCTCAGTATGCTAAATCAAGTTCAACCAGCCTGGCAGAGCATCTTGGGAGTAGCTATGTTGCTAATGTTCCAGAAACACCAAATTGGCTTTCTGAGGAGATGATTAGGTGCATATCGGCTATATATTGTGAACTTACAGAGCCACCTTCTCTTGGTCATAAAAATGCTCCATCACCTATTTCATTCTCATCTTCTGGTAACGAGTTATCTACACAGAGCCAGTGTACTAAGAAGGGATCACATTGGAAGGAGCATTCATCCTTCAATTTAAACTCCACTAACCCTTTCCACGTCAGAGGGTCCAAAGAATTTAGTGGACCTTATTGCTCTATGATAAGGATACAGCAATTATGCACAGATAGTCAGAAATTAAAAGAAATTGAGTACATGCTACGAAGGTTTAGGTCACTTGTTTCTCGGCTGGAAGATGTTAATCCTAGAAATATGAAGCATGAAGAAAAACTTGCCTTTTGGATTAATGTGCACAATTCCTTAGCAATGCATGCCTTATTAGTTTATGGAGTTTCAGCCAACCATGTTAAAAGAATGTCTTCGGTACTGAAGGCCGCATATAACATTGGGGGACATACTCTAAGCGTAGACCTGATACAGAACTTCATTCTGGGATGCAGATTGCCTCGCCCAGGACAATGGCTGAGGTTGTGGTTTCCTTCAATGACAAAACCAAAGGTTAGAGATGCAAGAAAAGGATATGCTATACATCGTCCAGAACCTTTATTACTCTTTGCTCTATGCTCAGGAAGCCATTCTGATCCTGCGGTACGTTTGTACACATCCAAGAGAGTCTTTGAGGAGTTACTATGTGCCAAAGAGGAATACATTCAGTCCACCATCACCATAAGCAAGGAACAGAAACTAGTTCTCCCAAAGATGGTTGATTCCTTTGCAAAAAATTCAGGTCTAGGAGCATCTGATTTGGTGGAGATGGTTAAGCCTTATCTACCCGATTCTCAAATGAAGAGCATTCAAGAGTTTCAATCAAAGACAAGCTGGAAAAGCATTGAATTAACCCATCATAACTTCACTTTCCATTACTTGATTTCAAAGGAATTAGCTTGGTAA 1884 0.4034 MHEIKWRDSGSKQFKFMDPTVSISSHKRSNSDPMKRRVMGDGLGSISEASCQPEVDPGELKQNIESKKRQYHNMDLQSSLTQEILQLQKRLQQQFVIRRALEKACYVPFSQDATIENSIPKAAKELIKEIGILELEVVHLEQYLLSLYRKRFDQQISTLSTKERRLELASDTNQGTSAVPGNDAISDKEISVVHCSNVISPRNSSGFKLKECNNQLGAETGLDSSIHRCHSTLSQRTTCSIEASPGNIETKAVVDSYHSLPLSMLEQAQYAKSSSTSLAEHLGSSYVANVPETPNWLSEEMIRCISAIYCELTEPPSLGHKNAPSPISFSSSGNELSTQSQCTKKGSHWKEHSSFNLNSTNPFHVRGSKEFSGPYCSMIRIQQLCTDSQKLKEIEYMLRRFRSLVSRLEDVNPRNMKHEEKLAFWINVHNSLAMHALLVYGVSANHVKRMSSVLKAAYNIGGHTLSVDLIQNFILGCRLPRPGQWLRLWFPSMTKPKVRDARKGYAIHRPEPLLLFALCSGSHSDPAVRLYTSKRVFEELLCAKEEYIQSTITISKEQKLVLPKMVDSFAKNSGLGASDLVEMVKPYLPDSQMKSIQEFQSKTSWKSIELTHHNFTFHYLISKELAW* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1039 627 PANTHER UNCHARACTERIZED 18 627 - -
Gso11g1039 627 PANTHER TERNARY COMPLEX FACTOR MIP1 LEUCINE-ZIPPER PROTEIN 18 627 - -
Gso11g1039 627 MobiDBLite consensus disorder prediction 22 57 - -
Gso11g1039 627 Pfam Leucine-zipper of ternary complex factor MIP1 75 154 IPR025757 -
Gso11g1039 627 Pfam Protein of unknown function, DUF547 413 548 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1039 Gso-Chr11 9297425 9305747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1039 - - gmx:100803450 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0388 12 3418227 3423669 Gso11g1039 11 9297425 9305747 GST