Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0978 ATGAATCGGGAAAAATTGATGAAGATGGCCGGTTCGGTTAGAACTGGGGGAAAGGGCACCGTGAGAAGAAAGAAGAAGGCTGTCCACAAGACAACAACCACAGATGACAAAAGGCTTCAGAGCACCCTGAAGAGAATAGGGGTGAATGCCATCCCGGCTATTGAGGAGGTCAATATCTTTAAGGATGACGTAGTTATCCAGTTTCTAAATCCCAAAGTTCAAGCATCCATTGCTGCTAATACTTGGGTTGTCAGTGGTTCTCCACAAACAAAGAAGTTGCAGGATATACTCCCTAGCATTATCCACCAATTAGGACCAGATAACTTGGAAAACCTGAAGAAGCTGGCCGAGCAATTCCAGAAGCAGGCTCCTGAAGGAGCCACTGGTTCAACCACCGCCCAAGAGGAGAATGATGATGACGATGTCCCAGAGCTTGTTCCAGGCCAGGATTTTGAGACAGCTGCTGAGGAGACCAAGGCTGCTTCCTAG 489 0.4785 MNREKLMKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIHQLGPDNLENLKKLAEQFQKQAPEGATGSTTAQEENDDDDVPELVPGQDFETAAEETKAAS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0978 162 SMART NAC_2 36 91 IPR002715 -
Gso11g0978 162 MobiDBLite consensus disorder prediction 1 30 - -
Gso11g0978 162 PANTHER TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER 1 160 IPR039370 -
Gso11g0978 162 Pfam NAC domain 36 91 IPR002715 -
Gso11g0978 162 MobiDBLite consensus disorder prediction 119 162 - -
Gso11g0978 162 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT BETA 1 160 - -
Gso11g0978 162 Gene3D - 48 104 IPR038187 -
Gso11g0978 162 ProSiteProfiles NAC A/B domain profile. 33 97 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0978 Gso-Chr11 8743210 8745876 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0978 K01527 - gmx:100306292 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0329 12 2928385 2931021 Gso11g0978 11 8743210 8745876 GST