Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0960 ATGGCTTTCAAACTGAAATCACTACCTCTCCTTTGCTCTCTTCACTCCCCTTCCCGCCAAAACCCTAATTCAACACTCTCAAACCATCACTTTTCTCGTCGCTTCTTCGCACCTTCCATTCCTCCCACCCTGTGCCTATCCGGCGCAGCCTCAGCGTCCACCTTTCATCGCCATCGCTTCTTCGTAACCGCTCGAAGCCAAGACGAAGACCAGATCACTGAGGCTCTTGAACAAGAAGAAGAGAAAGACAACGAAGAAATATCGAGGCAGGGTGAGAAAAAGGAACTCGCGAAGCAAGGCATATGGGATCAGATAAAGGAAATTGTGATGTTCACAGGACCAGCAACTGGACTTTGGATATGTGGACCACTTATGAGTCTCATCGATACTGCAGTTATTGGTCAGAGAAGTTCAATTGAGCTTGCTGCTTTAGGTCCTGCTACAGTTGTTTGTGATTACATGTGCTACGTGTTCATGTTTCTATCAATTGCTACTTCCAATATGGTTGCTACTGCCCTTGCCAAACAGGACAAAGAAGAAGTACAACATCACATATCTGTATTGCTTTTTGTTGGGTTATCTTGTGGCATTGCGATGCTTTTGTTCACAAGGCTATTTGGTGCTGCTATAATAACTGCTTTCACTGGACCAAAGAATGTACACGTAGTACCTGCAGCTAGCAATTATGTAAAGATTCGAGGCTTGGCATCACCTGCTTTACTTGTTGGATGGGTAGCTCAGAGTGCAAGTCTTGGTATGAAAGATTCCTTGGGACCCTTGAAAGCTTTAGCTGCTGCTACAGTTATAAATGTCGCTGGTTGTGTACTTTTGTGCACCTATTTAGGTTATGGAATTGTAGGGGCTGCGTGGGCTACAATGGTTTCACAAGTTGTTGCTTCTTACATGATGATTCAAAATCTAAATATGAAGGGATATAATGCACTTGCCTTCTCCATTCCTTCAGGGAAGGAACTTCTGACGATATTTGGGCTTGCTGCTCCTGTTTTTATAACATTGATGTCAAAGGTGGCTTTTTACGCACTACTTATATATTTTGCTACATCAATGGGTACACATACAATGGCTGCTCATCAAGTCATGGTCCAAACCTATTTAATGTGTACCGTATGGGGTGAACCTCTCTCCCAAACCTCTCAATCATTTATGCCTGAATTGATATATGGAGTAAATCGGAGTTTGTCAAAGGCCCGAATGCTTCTAAGGTCTCTCGTGATAATTGGAGCTATACTTGGATTGTTGTTAGGGATTATTGGAACATCGGTTCCTTGGTTATTTCCCAATATTTTTACACCTGATCGGATGGTCATCCAGGAGATGCATAAGGTGCTGATTCCATACTTTATAGCCCTGGCTGTAACACCCCCTACTGTCAGCCTTGAGGGAACGTTGCTGGCTGGACGGGATCTGAAATTTATAAGTTTGTCAATGAGTGGATGCTTTTGTGTGGGTTCACTAGTATTATGGGCTTTGAGTAGTAGATACGGTTTGCTTGGCTGCTGGTTTTCCCTCGCATTATTTCAATGGGCTCGGTTTTCAATGGCCCTCCAGCGCCTTCTTTCTCCCAAAGGCATCTTATACTCGGAAGATACAGAACAGTATAAGCTGCTAAAGCTAAGGACTGCCTAG 1647 0.4378 MAFKLKSLPLLCSLHSPSRQNPNSTLSNHHFSRRFFAPSIPPTLCLSGAASASTFHRHRFFVTARSQDEDQITEALEQEEEKDNEEISRQGEKKELAKQGIWDQIKEIVMFTGPATGLWICGPLMSLIDTAVIGQRSSIELAALGPATVVCDYMCYVFMFLSIATSNMVATALAKQDKEEVQHHISVLLFVGLSCGIAMLLFTRLFGAAIITAFTGPKNVHVVPAASNYVKIRGLASPALLVGWVAQSASLGMKDSLGPLKALAAATVINVAGCVLLCTYLGYGIVGAAWATMVSQVVASYMMIQNLNMKGYNALAFSIPSGKELLTIFGLAAPVFITLMSKVAFYALLIYFATSMGTHTMAAHQVMVQTYLMCTVWGEPLSQTSQSFMPELIYGVNRSLSKARMLLRSLVIIGAILGLLLGIIGTSVPWLFPNIFTPDRMVIQEMHKVLIPYFIALAVTPPTVSLEGTLLAGRDLKFISLSMSGCFCVGSLVLWALSSRYGLLGCWFSLALFQWARFSMALQRLLSPKGILYSEDTEQYKLLKLRTA* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0960 548 Pfam MatE 122 275 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso11g0960 548 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 37 537 - -
Gso11g0960 548 TIGRFAM matE: MATE efflux family protein 116 507 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Gso11g0960 548 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 37 537 IPR044644 -
Gso11g0960 548 CDD MATE_DinF_like 106 518 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0960 Gso-Chr11 8587327 8593089 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0960 K03327 - gmx:100778295 1060.06