Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0954 ATGCATCAATCAATGAAAATGAAGAAGGTGTTGAGGAGCTTGTTCCAAATTGCGGTTTTTCATGTGTTGTTAAAACCAAAAGCGGGATTGGGGAGCAGCCACGACTACGGAGACGCGTTGTCGAAGGCGATTATTTTCTTCGAGGGACAGCGATCGGGATTCCTGCCAGAGGATCAGAGAGTGAGTTGGCGAGGGAAGTCGGGGCTGAGCGACGGGTGGAACTACAACACGGATCTCACCGGCGGCTACTACGACGCCGGCGACAACGTCAAATTCGGGTTTCCGATGGCCTTTACCACCACAATGCTTGCGTGGAGCGTGCTCGAATTCGGTGACGTCATGCCTCCCAATGAGCTCAGGAACGCCCTCGTCGCAATTCGTTGGGCCACCGATTATCTCCTCAAGACTGTTTCTCAGCCCAATCGGATTTTCGTTCAGGTGGGTGATCCAAACTCAGACCATGAATGTTGGGAGAGACCAGAGGACATGGATACAGCCAGGACTACGTATGCTGTTGATGCACCAAACGCGGCTTCCGATGTCGCCGGTGAAACAGCCGCCGCTCTAGCCGCCGCATCCATGGCATTCCGGTCATCGGACCCGGGTTACTCGGAGACATTGCGTCGTAATGCTATTACAGCCTTCCAATTTGCAGATAACTACAGGGGTGCTTACAGTGACAATGATAATGTTAAGTATAATGCCTGCCCATATTACTGCGATTTTGATGGCTATCAGGATGAGTTGTTATGGGGAGCCGCATGGCTAAGGAGGGCGACGCAGGACGATAATTTCCTCAACTACATTCAAACCAATGGCAAAACTCTTGGTGCCGACGACAACATCAATGAGTTTGGTTGGGACAACAAACATGCTGGCCTCAACGTACTTGTCTCTAAGGAAGTCATAGAAGGAAACATGTACTCTCTTGAGTCCTACAAGTCCTCAGCAGAGAGCTTCATTTGCACCCTCATACCCGAATCACCAAGCTCACACATAGAGTACACGCCAGGTGGACTTGTGTACAGACCCGGAGGCAGCAACTTGCAACATGCAACTTCAATTGCTTTCCTTGAATTGGTCTATGCCAATTACCTAACACACGCTTCACAAGCCATCAATTGTGGCAATGTCTATGTTAGTGCACAAACACTTCGCCAACATGCTAAGAGGCAAGTTGATTACATTTTGGGTGATAACCCAATGGGATTATCCTACATGGTTGGCTATAGCAACTACTATCCACAACGTATTCATCACCGTGGATCTTCCTTACCCTCCATCAAGGATCATCCTCAGTTCATTGCATGCAAAGAAGGTTCAATTTATTACAATTCCACCAATCCCAATCCTAATGTTCTTGTTGGTGCCATTGTTGGAGGACCTGACGAAAATGATGATTATGTGGATGATCGAGTTGATTTTAGGAAATCCGAGCCAACCACATACATTAACGCACCATTTGTTGGGGTTTTAGCATATTTTGCTGCTAATCCCAACTTTAGTTAA 1509 0.4785 MHQSMKMKKVLRSLFQIAVFHVLLKPKAGLGSSHDYGDALSKAIIFFEGQRSGFLPEDQRVSWRGKSGLSDGWNYNTDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVLEFGDVMPPNELRNALVAIRWATDYLLKTVSQPNRIFVQVGDPNSDHECWERPEDMDTARTTYAVDAPNAASDVAGETAAALAAASMAFRSSDPGYSETLRRNAITAFQFADNYRGAYSDNDNVKYNACPYYCDFDGYQDELLWGAAWLRRATQDDNFLNYIQTNGKTLGADDNINEFGWDNKHAGLNVLVSKEVIEGNMYSLESYKSSAESFICTLIPESPSSHIEYTPGGLVYRPGGSNLQHATSIAFLELVYANYLTHASQAINCGNVYVSAQTLRQHAKRQVDYILGDNPMGLSYMVGYSNYYPQRIHHRGSSLPSIKDHPQFIACKEGSIYYNSTNPNPNVLVGAIVGGPDENDDYVDDRVDFRKSEPTTYINAPFVGVLAYFAANPNFS* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0954 502 Gene3D - 32 498 IPR012341 GO:0005975
Gso11g0954 502 PANTHER ENDOGLUCANASE 24 13 501 - -
Gso11g0954 502 PANTHER ENDO-1,4-BETA-GLUCANASE 13 501 - -
Gso11g0954 502 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 395 421 IPR018221 -
Gso11g0954 502 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 468 486 IPR033126 -
Gso11g0954 502 Pfam Glycosyl hydrolase family 9 36 492 IPR001701 GO:0004553|GO:0005975
Gso11g0954 502 SUPERFAMILY Six-hairpin glycosidases 24 497 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0954 Gso-Chr11 8540101 8547301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0954 14 498 Glycoside Hydrolase AT1G70710 58.969 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0954 K01179 - gmx:100101849 1024.62