Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0898 ATGGATTATGAGGCTGATGGTTTTGGTGCCAATGGCGAGGGAGAGAGCAAGAGAGTAGTGGGTGGTGAAGGGGTTTCTGAGGAGAGTGTAGCGGGCTCTGATCAAGTCAAGGGTTTAGAAACAGAGGAGGTTTTTCAGGAGGCAATGGAGCCACGGGAGCAGGTCCATGATCAAGGATCCGAACTCAATTTGGAGGATACGGTAGTTGATAAACAATATGATGCTGAAACCGGTGTTGCATTGACTTCTGCTTTGGCGGATGGAAATACTCCAGATGCCGCGCAGGAGCCCGATTACTTTAAGGAGGCTGTTTTGGCTGATGCTGACTCTGGGAAGCTGGGGGGAGATGATGTAATTTCTGAGCAAGACTTGGAGGAAAGGGATGGGCAGGGAAGTGATAATGTTCATCTGGATGGTGTTGATTCTGGAGTGCCTGTAGATGGAGAAATTTTTGATGAATCCCATGGTGTGGGGGATGATAATCTGGAGAGTAGTGATGGGGGTGGTGGAAAGGAAGAATCTGGGTTAAATTCTGACAGAGAGATGTTAGTTCAGGAGAATGGTACTATGGTGGATGAAAATTCTGGTTTGGTGAGTGAGAGGGCTGAAATCGATGATTCTGAATTCATGACTCCTAGAGAAAATGGTGGTATGATATTTGAGAATGGAAGCACAAACAAGGTCGATGGTGTTGCTACTGAACCTATTATGGAATCTGAATCCAGTGAGGTTATTCCAGCCCAAGGTACTGATGCTGGGGATTTGAAGGAGTGTGGCTCAGATACTGAACTTGGAGATGACAAGATAGAGGTAAAGTTAAATGCTTCAGCTGATCCTTCTGGGGAGATTCAAGATGATACATCTGAAGAAGTACACGACAATTCGGCTCACATGACTTTAGAACATCAAGATGAAGTAACTAGGGATATGAAGGATGATTCTCTGGGCACTAATATGAGTCACGAGGATAGAAATGGTGAAGAAATGAGTACTGATGGCATTCAAAATACTGAAGTAAGAGATTATGGTAATGGCCATGCTGAAGCTGAAAGCTCACCACCCTTTTTGGAAAATTCCTCTACTAATCTGACACCGTCTATTCAGGAGGCTAGTGCAGCTGAACCAAAGGAAGCAAGTAATAAGGATGATCAATCTCAGATTTTTGATGAAGAGCATAGAGATCATGACAATACTTCTGTGGTTGAGGAGCCTGAAAGCATACAGGAGAAGATTATTCAACAGACAGGAACCACTCCTAGTGCAGCTGAACCAAAGGAAGCAAGTAATAAGGATGATCAATCTCAGATTTTTGATGAAGAGCATAGAGATCATGACAATACTTCTGTTGTTGAGGAGCCTGAAAGCATACAGGAGAAGACTATTCAACAGACAGGAACCACTCCTAGTGCAGCTGAACCAAAGGAAGCAAGTAATAAGGATGATCAATCTCAGATTTTTGATGAAGAGCATAGAGATCATGACAATACTTCTGTGGTTGAGGAGCCTGAAAGCATACAGGAGAAGATTATTCAACAGACAGGAACCACTCAAGTGACTGGAGAGCAACATGTTCAACCTGCAGCAGATATTTCTTCTTCATCTAAAAGGTCTGCTGGTACTGTGCCTACTCCTGTCCGTCCTTCATCTGAAAATTCTCCTGCTGCTGGGCCCACTCCTGTTCATCCAACTGGCCTTGGTCGTGCAGCTCCATTACTGGAACCTGCATCTCGGGTAGTGCAGCAGCCCCGTGCTAATGGTGCCGTGTCTAATACTCAGTCCCAGCAAATGGAGGACTCCTCGAGTGGGGAGGCTGAGGAGTATGATGAGACACGTGAGAAACTTCAGATGATCAGGGTGAAGTTTTTACGGTTGGCTCATAGGCTTGGGCAAACTCCCCATAATGTTGTTGTAGCTCAAGTTTTATATAGATTAGGACTGGCTGAGCAACTCCGAGGAAGGAATGGGGGTCGTGTTGGTGCTTTTAGCTTTGATCGTGCAAGTGCAATGGCTGAGCAGCTTGAAGCAGCAGGTCAGGAGCCACTTGATTTCTCTTGTACAATTATGGTCCTTGGAAAGACAGGAGTTGGTAAAAGTGCTACCATCAATTCTATTTTTGATGAGGTTAAGTTTAATACCAGTGCTTTTCATATGGGAACCAAGAAGGTTCAGGATGTTGTGGGAACAGTGCAGGGCATTAAGGTACGGGTCATTGATACGCCGGGACTTCTACCTTCCTGGGCAGACCAGCGAAGCAATGAGAAGATCCTCCACTCTGTTAAGCACTTTATTAAGAAAACTCCACCTGATATTGTGTTGTATCTTGATAGGTTAGATATGCAGAGCAGGGATTTTAGTGATATGCCACTCTTGCGCACAATAACTGAAATTTTTGGGCCATCCATTTGGTTCAATGCCATTGTGGTTCTGACTCATGCTGCATCTGCTCCTCCTGAAGGCCCTAATGGTACTGCTTCCAGCTATGACTGGTTTGTTACTCAACGTTCTCATGTTGTGCAGCAAGCCATTCGTCAAGCAGCTGGTGACATGCGTCTCATGAATCCTGTATCCTTGGTGGAGAACCATTCTGCTTGCAGAACAAATAGGGCTGGTCAGAGAGTATTGCCAAATGGCCAGGTTTGGAAACCTCATCTGTTACTTCTATCTTTTGCCTCCAAAATTCTGGCTGAAGCAAATGCTCTTCTCAAGTTACAAGATAGTCCACCTGGGAAGCCATATGTAGCTCGAACAAGAGCGCCTCCATTACCTTTTCTTTTGTCAACCCTTCTCCAATCAAGACCGCAGTTAAAGTTGCCAGAGGAGCAGTTTGGTGATGAGGACAGTCTTGATGATGACCTTGGTGAATCATCAGAGTCTGATGATGAAAATGAACATGATGACTTGCCGCCATTTAAACCTTTAACTAAGGCCCAGGTGGAAGAGCTGTCTAAAGCTCATAAGAAAGCATATTTTGATGAGTTAGAGTATAGAGAAAAGCTTTTGATGAAGAAGCAATTGAAGGAAGAGAAAAAGCAACGAAAAATGTTGAAGAAAAGGGCAGAATCAGCAAAAGATCTGCCAAGTGACCATAGTGAAAATGTGGAAGAAGAAAGTGGCGGTGCAGCTTCTGTCCCTGTTCCCATGCCAGATTTGGCCCTGCCTGCTTCTTTTGATTCTGATAACCCCACTCACCGGTATCGTTATCTTGATTCGTCATCAAATCAGTGGCTTGTAAGACCTGTTTTAGAAACTCATGGATGGGATCATGATGTGGGTTATGAAGGGTTGAATGTAGAAAGATTGTTCGTTGTCAAGGAAAAGATTCCTTTATCTTTCTCCGGTCAGGTTACTAAAGATAAAAAGGATGCTAATGTTCAGATGGAAATATCCAGTTCAGTTAAGCATGGGAAAGGGAAAGCAACTTCATTAGGTTTTGATTTGCAAACTGTGGGGAAGGACTTGGCTTATACATTACGCAGTGAGACAAGATTTACTAATTTTAGAAGAAATAATGCAACTGCTGGTCTCTCATTTACTTTACTTGGTGATGCCTTATCATCTGGGTTGAAGATTGAAGACAAATTGGTTGCTAGTAAGCGATTCAAGCTTGTTGTCAGTGGTGGTGCAATGACAGGGCGGGGCGACATTGCTTATGGTGGCAGTTTGGAGGCCCAACTGAGAGATAAGGATTATCCTCTTGGTCGTTTCTTAACTACGCTTGGCCTTTCTGTTATGGATTGGCATGGAGATCTTGCTGTTGGGTGCAATGTGCAATCTCAGATCCCAGTAGGACGACATACAAACCTTGTTGCCCGGGCAAATTTGAATAATCGAGGGGCAGGGCAAATAAGTATTCGATTAAATAGTTCAGAACAGCTTCAAATTGCTTTGATTGGTCTCATCCCTCTCCTAAAGAAGCTAGTTGGTTATCATCAACAAACGCAGTTTGGACAATACTGA 3957 0.4405 MDYEADGFGANGEGESKRVVGGEGVSEESVAGSDQVKGLETEEVFQEAMEPREQVHDQGSELNLEDTVVDKQYDAETGVALTSALADGNTPDAAQEPDYFKEAVLADADSGKLGGDDVISEQDLEERDGQGSDNVHLDGVDSGVPVDGEIFDESHGVGDDNLESSDGGGGKEESGLNSDREMLVQENGTMVDENSGLVSERAEIDDSEFMTPRENGGMIFENGSTNKVDGVATEPIMESESSEVIPAQGTDAGDLKECGSDTELGDDKIEVKLNASADPSGEIQDDTSEEVHDNSAHMTLEHQDEVTRDMKDDSLGTNMSHEDRNGEEMSTDGIQNTEVRDYGNGHAEAESSPPFLENSSTNLTPSIQEASAAEPKEASNKDDQSQIFDEEHRDHDNTSVVEEPESIQEKIIQQTGTTPSAAEPKEASNKDDQSQIFDEEHRDHDNTSVVEEPESIQEKTIQQTGTTPSAAEPKEASNKDDQSQIFDEEHRDHDNTSVVEEPESIQEKIIQQTGTTQVTGEQHVQPAADISSSSKRSAGTVPTPVRPSSENSPAAGPTPVHPTGLGRAAPLLEPASRVVQQPRANGAVSNTQSQQMEDSSSGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGGRVGAFSFDRASAMAEQLEAAGQEPLDFSCTIMVLGKTGVGKSATINSIFDEVKFNTSAFHMGTKKVQDVVGTVQGIKVRVIDTPGLLPSWADQRSNEKILHSVKHFIKKTPPDIVLYLDRLDMQSRDFSDMPLLRTITEIFGPSIWFNAIVVLTHAASAPPEGPNGTASSYDWFVTQRSHVVQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDSPPGKPYVARTRAPPLPFLLSTLLQSRPQLKLPEEQFGDEDSLDDDLGESSESDDENEHDDLPPFKPLTKAQVEELSKAHKKAYFDELEYREKLLMKKQLKEEKKQRKMLKKRAESAKDLPSDHSENVEEESGGAASVPVPMPDLALPASFDSDNPTHRYRYLDSSSNQWLVRPVLETHGWDHDVGYEGLNVERLFVVKEKIPLSFSGQVTKDKKDANVQMEISSSVKHGKGKATSLGFDLQTVGKDLAYTLRSETRFTNFRRNNATAGLSFTLLGDALSSGLKIEDKLVASKRFKLVVSGGAMTGRGDIAYGGSLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAVGCNVQSQIPVGRHTNLVARANLNNRGAGQISIRLNSSEQLQIALIGLIPLLKKLVGYHQQTQFGQY* 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0898 1318 MobiDBLite consensus disorder prediction 1010 1056 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 353 369 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 275 568 - -
Gso11g0898 1318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 678 819 IPR027417 -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 114 134 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 110 180 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 285 329 - -
Gso11g0898 1318 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 505 1312 IPR045058 -
Gso11g0898 1318 CDD Toc34_like 657 902 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 583 600 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 425 452 - -
Gso11g0898 1318 PANTHER TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-LIKE 505 1312 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 506 556 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 583 609 - -
Gso11g0898 1318 Pfam AIG1 family 685 818 IPR006703 GO:0005525
Gso11g0898 1318 MobiDBLite consensus disorder prediction 204 227 - -
Gso11g0898 1318 Pfam Translocase of chloroplast 159/132, membrane anchor domain 1043 1307 IPR024283 -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 453 473 - -
Gso11g0898 1318 Gene3D - 654 902 IPR027417 -
Gso11g0898 1318 ProSiteProfiles AIG1-type G domain profile. 682 911 IPR006703 GO:0005525
Gso11g0898 1318 Coils Coil 998 1025 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 938 971 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 474 501 - -
Gso11g0898 1318 TIGRFAM 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 562 1311 IPR005690 GO:0003924|GO:0005525|GO:0009707|GO:0045036
Gso11g0898 1318 MobiDBLite consensus disorder prediction 1010 1035 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 408 424 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 1 39 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 943 963 - -
Gso11g0898 1318 MobiDBLite consensus disorder prediction 375 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0898 Gso-Chr11 8054444 8059287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0898 - - gmx:100776898 2485.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0258 12 2284316 2288754 Gso11g0898 11 8054444 8059287 GST