Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0892 ATGATAGATTCAAATCCACCACTCGTGCAACACTATGGGGCACTTGTGAGAAACTCTGGTGAAGAAGCCAAAAAGGCTAAAAGTTTTAATGATCAAAATCATCCTTTAGTGGATGCATGTGACCTACCCTTGATAGACCTTAGTGGCCTTAAAAGTTCTAATGAAAGAGAAAGGAAGGCTTGCACTGCAGCAATATGCAAGGCAGCATCAGAATGGGGATTTTTTCAAGTGGTGAATCATGGTATAAGCCATGACTTGCTAAGAAAAATGAGAGAGGAACAAGTGAAGTTGTTTGAAGTACCGTTTGAGAAGAAAGTTACTTGCGGGCTTCTAAATAACCCATATAGGTGGGGGACACCAACAGCTACTCGTTCAAAACACTTCTCATGGTCTGAAGCTTTCCACATTCCTCTCACCATGATCTCAGAAGCTGCTTCCTGGGGTGAATTCACTTCTTTGAGGGAAGCAATAAATGAGTTTGCACCAGCGATGTTAGAAGTATCTAGGTTGTTGGCCAGCATTCTAGCACAAAACCTGGGCTACCCGGAGGATGCACTTGAAAAACTCTGTGATGCTGGCACATGCTTTCTGCGATTAAATCACTATCCATGCTGCCCAAAATCTAAAGATGAAATTTTTGGATTAGTTCCTCACACTGACAGCGATTTTCTTACTATCCTTTATCAAGATCACGTCGGTGGACTCCAACTCATGAAAGATTCCAAATGGGTCGCTGTAAAACCAAACCCAGATGCTCTCATTGTTAACATTGGGGACCTTTTTCAGGCTTGGAGTAATGATGAGTACAAAAGCGTGGAGCACAAGGTTGTGGCAAATAACAAAATGGAAAGATACTCCATAGCATATTTCCTATGTCCTTCTTACAGTACTGTCATAAACGGCTGCAAAGGACCTTCTGTATATAGGAAGTTCACGTTTGGAGAATACAGACACCAAATTCAAGAAGATGTCAAGAAAATAGGACACAAAATTGGACTATCAAGATTTCTACTTTAA 1017 0.412 MIDSNPPLVQHYGALVRNSGEEAKKAKSFNDQNHPLVDACDLPLIDLSGLKSSNERERKACTAAICKAASEWGFFQVVNHGISHDLLRKMREEQVKLFEVPFEKKVTCGLLNNPYRWGTPTATRSKHFSWSEAFHIPLTMISEAASWGEFTSLREAINEFAPAMLEVSRLLASILAQNLGYPEDALEKLCDAGTCFLRLNHYPCCPKSKDEIFGLVPHTDSDFLTILYQDHVGGLQLMKDSKWVAVKPNPDALIVNIGDLFQAWSNDEYKSVEHKVVANNKMERYSIAYFLCPSYSTVINGCKGPSVYRKFTFGEYRHQIQEDVKKIGHKIGLSRFLL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0892 338 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 136 IPR026992 -
Gso11g0892 338 Pfam 2OG-Fe(II) oxygenase superfamily 196 293 IPR044861 -
Gso11g0892 338 SUPERFAMILY Clavaminate synthase-like 36 321 - -
Gso11g0892 338 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 23 330 - -
Gso11g0892 338 PANTHER OS02G0630300 PROTEIN 23 330 - -
Gso11g0892 338 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 293 IPR005123 -
Gso11g0892 338 Gene3D - 12 326 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0892 Gso-Chr11 7991448 7995496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0892 37 316 Glycosyltransferase AT5G59530 31.313 3.45e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0892 - K04125 gmx:100819653 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0251 12 2231838 2234710 Gso11g0892 11 7991448 7995496 GST