Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0863 ATGTACTTGAGGAGAATACAATGCAGAGATCGGACATGGGCTTTGGTGTTGCAGCCATTGAAATACTTTTTTAGGCCAAGATTCTCTGATCAACGATGTTTTCAATCTTTGTCCCCTAAGACCACTGTGAAAGAATATGCTTCACACGGAAGGATCATCAGAAAACATCTTTTAGGTTTAGATTCATGCAGGCATACTTCATCTAGAAATAGTTTCACCGTTCCGGACAGAAGGCCTAGTTTATGTCTAAACAGTACTCAGTTACGTGCCTATAGTTCTGAAAGTGATGGAAGAAATGCAAGTGAGGATAAGCATGCACATGTTAATGATGGAGCTAATTTTGATAAAGGACGGAAACAAGACAAGTTTGGGAAAGATGTCAAGTACAGCAATTCACATGCTCGACTTGGAGAACAGGAACAAGAGGAATGGCTTAATAATGAGAAGCTTTCTATAGAAAGTAAAAGGAGAGAATCACCATTTTTGACAAGAAGGGATAAGTTTAAAAAAGAGTTTATGAGAAGAATTATTCCTTGGGAGATGATAAACATTTCCTGGGACACATTTCCTTATCACATTCATGAGAATACCAAAAATCTTCTGGTGGAATGTGCTGCTTCCCATTTGAGACATAATAAGCTTGCTTCATCTTTTGGCAGTCGCCTCTCATCTTCAAGTGGGAGAATATTGCTTCAGAGCATTCCTGGAACTGAGCTGTATCGAGAGAGATTGGTTAGGGCTCTTGCACAAGATTTACAAGTTCCTCTGTTAGTGCTTGATAACAGCATTCTTGCTCCTTATGATATTGATGATGATTTATCATCAGATTATGAGTCTGATGAGGATAATGCAGAGTCTGGGGAGGAGGGCTCTTTGGAATCAGAGAATGAGGATGATAATGATGCTACAAATGAAGAAGAGTGGGCTAGCAGTACCGAGGCAAAGTCAGATGCAAGTGATAATGAAGATGCAATAGCGGCTGCTGAGGCACACCTTAAGAAGGTTAAAGCAGCTGTTCTTCGGAAACTTGTTCCTTACAATGTTGAAGAATTAGAAAAGGAAGTGTCTGGTGAATCTGAGAATTCTGAGTCATCCAAGTCTAATGATGTCAAATCTTCTAATGAATCTGGATGCCAGCTAAGAAAAGGTGACCGTGTGAAGTACATTGGGCCATCTGTTAAAGTTACAGATGAGGATAGGATCATACTGGGGAAGATACCTACATTTGATGGTACAACTAATGCTTATACTATTATACATGGCAGGCCTTTAACTAAAGGTCAGAGAGGAGAGGTATATGAGGTTAATGGAGATCGAGTTGCTGTCATCTTGGATATTAATGAAGATAGGGTCAATAAGGGCGAGGTGGAGAATCTTAATGATGATCATACAAAACCCCCAATTTATTGGATACATGTTAAGGACATTGAGAATGATCTTGATGCTCAATCACAGGATTGCTACATAGCAGTGGAGGCTTTATGTGAGGTTTTGCATCACAGACAGCCTCTTATTGTCTATTTTCCGGACAGTTCACAATGGTTACATAAAGCCGTTCCTAAGTCAAACAGAAATGAGTTTTTTCATAAGGTTGAGGAGATGTTTGACCGGTTATCTGGCCCTATAGTATTCATTTGTGGGCAAAACAAAGTTCAGTCAGGATCAAAGGAGAAAGAAGAATTCACAATGATTCTTCCAAACTTTGGACGTGTTGCTAAGCTGCCTCTTTCTCTGAAGCGTTTGACTGAGGGAATTAAAGGGGACAAGACATCAGAAGATGATGAAATTAACAAGCTCTTCTCCAATGTTTTGAGTATGCATCCACCTAAGGATGAGAATCTGCTGGCAACATTTAAGAAACAACTTGAGGAAGATAAGAAAATTGTGACTTCACGTAGTAATTTGAATGTATTACGGAAGGTTCTCGAAGAACATCAGCTATCATGCATGGACCTTTTGCATGTAAATACTGATGGCATCTTTTTGACAAAGCATAAAGCTGAAAAAGTGGTAGGCTGGGCAAAAAATCATTACTTGTCATCATGCTTGCTTCCTTCTGTTAAAGGAGAAAGATTGTGCCTACCTCGTGAAAGTCTTGAAATTGCAGTCTCAAGATTGAAGGGCCAGGAAACTATGTCACGGAAGCCTTCTCAAAGCCTCAAGAACCTTGCAAAGGATGAGTTTGAGAGCAATTTCATTTCAGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAAAAGGCACTTAATGAACTTGTTATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCGTGGGAATCTGTTACGGCCCTGTAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACCCTTCTGGCCAAGGCACTTGCAACCGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCGACCCTTACTTCAAAGTGGTTTGGAGATGCTGAAAAACTAACCAAAGCGCTTTTCTCATTTGCCAGCAAGCTTGCTCCTGTCATTGTATTTGTCGATGAAGTTGACAGTCTGCTTGGAGCTCGAGGTGGTGCTTTTGAGCATGAGGCCACTAGAAGAATGAGGAACGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAACCAAAGAATCCTTATTCTGGGTGCAACTAACCGGCCATTTGACCTTGATGATGCTGTTATTCGTCGTTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAATGAAGATTTTAAGAATCTTTCTTGCACAAGAAAATTTGAATTCTGATTTTCAGTTTGACAAACTTGCTAACTTGACTGATGGATACTCTGGCAGTGATTTGAAGAACCTCTGTATTGCTGCGGCATATAGACCTGTTCAAGAACTCTTAGAGGAAGAAAAGAAGGGAGCCAGTAATGATACAACTTCGATACTAAGGCCTCTTAATTTGGATGATTTTATTCAGGCAAAATCCAAGGTGGGTCCATCAGTTGCATATGATGCAACAAGCATGAATGAGTTGAGGAAGTGGAACGAAATGTACGGAGAAGGCGGTAGTAGAACAAAAGCGCCGTTTGGATTTGGGACCTGA 3117 0.4049 MYLRRIQCRDRTWALVLQPLKYFFRPRFSDQRCFQSLSPKTTVKEYASHGRIIRKHLLGLDSCRHTSSRNSFTVPDRRPSLCLNSTQLRAYSSESDGRNASEDKHAHVNDGANFDKGRKQDKFGKDVKYSNSHARLGEQEQEEWLNNEKLSIESKRRESPFLTRRDKFKKEFMRRIIPWEMINISWDTFPYHIHENTKNLLVECAASHLRHNKLASSFGSRLSSSSGRILLQSIPGTELYRERLVRALAQDLQVPLLVLDNSILAPYDIDDDLSSDYESDEDNAESGEEGSLESENEDDNDATNEEEWASSTEAKSDASDNEDAIAAAEAHLKKVKAAVLRKLVPYNVEELEKEVSGESENSESSKSNDVKSSNESGCQLRKGDRVKYIGPSVKVTDEDRIILGKIPTFDGTTNAYTIIHGRPLTKGQRGEVYEVNGDRVAVILDINEDRVNKGEVENLNDDHTKPPIYWIHVKDIENDLDAQSQDCYIAVEALCEVLHHRQPLIVYFPDSSQWLHKAVPKSNRNEFFHKVEEMFDRLSGPIVFICGQNKVQSGSKEKEEFTMILPNFGRVAKLPLSLKRLTEGIKGDKTSEDDEINKLFSNVLSMHPPKDENLLATFKKQLEEDKKIVTSRSNLNVLRKVLEEHQLSCMDLLHVNTDGIFLTKHKAEKVVGWAKNHYLSSCLLPSVKGERLCLPRESLEIAVSRLKGQETMSRKPSQSLKNLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIVFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLNSDFQFDKLANLTDGYSGSDLKNLCIAAAYRPVQELLEEEKKGASNDTTSILRPLNLDDFIQAKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKAPFGFGT* 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0863 1038 MobiDBLite consensus disorder prediction 92 123 - -
Gso11g0863 1038 MobiDBLite consensus disorder prediction 361 377 - -
Gso11g0863 1038 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 1036 - -
Gso11g0863 1038 Gene3D - 744 1020 IPR027417 -
Gso11g0863 1038 Gene3D - 917 1002 - -
Gso11g0863 1038 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1036 - -
Gso11g0863 1038 MobiDBLite consensus disorder prediction 270 321 - -
Gso11g0863 1038 Pfam ATPase family associated with various cellular activities (AAA) 785 915 IPR003959 GO:0005524|GO:0016887
Gso11g0863 1038 ProSitePatterns AAA-protein family signature. 888 907 IPR003960 GO:0005524|GO:0016887
Gso11g0863 1038 MobiDBLite consensus disorder prediction 351 379 - -
Gso11g0863 1038 MobiDBLite consensus disorder prediction 96 123 - -
Gso11g0863 1038 SMART AAA_5 781 918 IPR003593 -
Gso11g0863 1038 Pfam AAA+ lid domain 938 973 IPR041569 -
Gso11g0863 1038 CDD AAA 783 916 - -
Gso11g0863 1038 Coils Coil 348 368 - -
Gso11g0863 1038 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 744 1007 IPR027417 -
Gso11g0863 1038 MobiDBLite consensus disorder prediction 271 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0863 Gso-Chr11 7708215 7726781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0863 744 976 Calmodulin-binding Proteins AT3G56690 38.559 2.23e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0863 - - gmx:100812718 1897.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0234 12 1984219 2000063 Gso11g0863 11 7708215 7726781 GST