Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0858 ATGGAGAAAGAGGAAGAGAGGGAAGAAATGTCTATGTTTGATGAGACAACAATAAGAGCACAGAGAGCTGCAAGGAGTGGAAACTGGAGATTGTTCAAGAGAATATTGGAGGAAGACACCAAGCGTTTGCTGGAGCCTTTTGACTTGTTTGGAAACACTGCCATTCACATTGCAACTCGCTCCAACAATCCATGGCTCCTCCATGAGTTGTTGGAAGTGCTACCTGCAAAGGACAGGTGGCATGCCCTGAGGATGGGGAATTGCGTGAACAACACCCTTCTCCATGAGACCATCTTTTGTACTAGGGTGGAGATGGCTGGCGTTGTGTTCAAGTTTGAGAAGGAGGCGCCGCCGGAGGACGCACCGGAAGAAAAGAAAGGGTTGCCACTTGTGGAGATCATAAATGACTCAGGTGAAACCCCTCTCTTCAGGGCTGCCAAACTAGGCATGCTTAAGATGCTCAAGTATATGGCCAAACATGCTCAGGGTGACATTCCAAGGCTTTTTGTTAGATTTGACAAACATTCCATTCTTCACGCTAGTATTCTTGGACAATTTTTTGATGTTGCTATTTGGTTGCTGAATATGGATGAAAAACTAGCCCAACACAGGGATATGAATGGAATGACGTGTCTTCAACTTCTATCTAATATGCCGCTTGTATTTCGGAGCCAAGCTACTTCCATGGGAGCCGTGAAGAATCTTATATATTACTTGCTACCTGAGGAAGGATATGAAATTGATGATGATGAGGAGGAGGAGGAGAATGGCAGTGCTGATTTCGGACAGAGGAGCGATTTAGAAAGTGGTCAACAAGACAAGGCCAAGTTGCCCAGTTCAGTTCTTTCAAGGATCAACTATGCTATTTGGAGAACTCTGGCTAAAGAGTTCAATGGAATTGGACGAATATGGCAACGCAAGAAGCAGCATAAGTTAGCAGAACATCTGGCTGAGCTTTTAGTGCAGAGGGACTTTTCATGGCAGATTTCTTTTCATGAAAACTTTCAACCCTTAATTGTATTGCCAGTTCTTTCATCCAAATCAGACAGGATAAAACACATTCACCACATGAAGGAGATGCACAAGACTATATCACATTCTAGAAGTTACAAACTTATAACCACCGCAACAAGTATTCCCCATTCTAAAAACTACACGCCACTTCTCATGGCAGCTGGCTCAGGAATCGTCGAAATCGTTGAGAAAATCATTGACAAGTTTCCCGAGGCCATTTGTCACGTTAGCCAGGATGAGCACAACGTTCTGCACATGGCTGTGAAGCACCGTCAGCTCAAAATCTTTAACATGTTGAAGAAACATTCAGCATTTAAATCATTGCTATTTCGGATAACTGCGGAAGGTCGTACTCTCTTGCACCAAATTTCGAGAATGGAGTTTTATGTAGAGCAACACCTACCTGGTGTGGCATTCCAACTACAAGATGAATTGCGTTGGTATGAACGAGTGAGAAACATTGTTCCCCCTCACTACCTGATGCACTGTGACAAAGACGGGCTAACAGCTGAGGATGTTTTGGAAATGGAACATCGTGAAATGCACAAAGAAGCAAAAGGGTGGATAAAGGAAACGGCTCAGTCATGCTCCACAGTGGCTGTCCTTGTTGCCACCGTCGTGTTTGCTGCGGCCTACACCATCCCAGGTGGCACTGATCAGAATAATGGCACACCCGTGTTTCTCGGTTCTCGAATTTTTCTCTTCTTCACTGCCACTGATGTTGTGGCACTTGTGAGCTCACTGGCTTCGGTAGTAATGTTCCTTTCGATCCTAACATCTCCGTTTGAGTTGTGGGATTTCCGTAGCTCTCTGCCGCGAAAACTGAGCTTAGGATTTGCCTCTCTATTCTTCTCATTGGTATGCACGATGCTGACATTCAGTGCAACAGTTTTGCTCACCGTTCGGTTGGAGAATCAACTGCAGCAATGGGCTTCCGTTTTGTTTTTCTGTGCTGTGTTCTTTCCTGTGGCAATATTTTGGAGGTTGCAATTCCCACTTTACAAGATGGTTCAAAGACTTGCTAAGCGGCTATTCAAGACGCTTAAACAAGCCGTGCCAACTACGTTGATAAACTATTTCAGGAAAAGGACTCGGAGAAGAAAGTATCACATTATCATTGACTAG 2139 0.4455 MEKEEEREEMSMFDETTIRAQRAARSGNWRLFKRILEEDTKRLLEPFDLFGNTAIHIATRSNNPWLLHELLEVLPAKDRWHALRMGNCVNNTLLHETIFCTRVEMAGVVFKFEKEAPPEDAPEEKKGLPLVEIINDSGETPLFRAAKLGMLKMLKYMAKHAQGDIPRLFVRFDKHSILHASILGQFFDVAIWLLNMDEKLAQHRDMNGMTCLQLLSNMPLVFRSQATSMGAVKNLIYYLLPEEGYEIDDDEEEEENGSADFGQRSDLESGQQDKAKLPSSVLSRINYAIWRTLAKEFNGIGRIWQRKKQHKLAEHLAELLVQRDFSWQISFHENFQPLIVLPVLSSKSDRIKHIHHMKEMHKTISHSRSYKLITTATSIPHSKNYTPLLMAAGSGIVEIVEKIIDKFPEAICHVSQDEHNVLHMAVKHRQLKIFNMLKKHSAFKSLLFRITAEGRTLLHQISRMEFYVEQHLPGVAFQLQDELRWYERVRNIVPPHYLMHCDKDGLTAEDVLEMEHREMHKEAKGWIKETAQSCSTVAVLVATVVFAAAYTIPGGTDQNNGTPVFLGSRIFLFFTATDVVALVSSLASVVMFLSILTSPFELWDFRSSLPRKLSLGFASLFFSLVCTMLTFSATVLLTVRLENQLQQWASVLFFCAVFFPVAIFWRLQFPLYKMVQRLAKRLFKTLKQAVPTTLINYFRKRTRRRKYHIIID* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0858 712 Gene3D - 351 477 IPR036770 -
Gso11g0858 712 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 40 680 - -
Gso11g0858 712 SMART ANK_2a 50 79 IPR002110 GO:0005515
Gso11g0858 712 SMART ANK_2a 173 202 IPR002110 GO:0005515
Gso11g0858 712 SMART ANK_2a 383 414 IPR002110 GO:0005515
Gso11g0858 712 SMART ANK_2a 137 167 IPR002110 GO:0005515
Gso11g0858 712 SMART ANK_2a 417 446 IPR002110 GO:0005515
Gso11g0858 712 PANTHER CASKIN 40 680 - -
Gso11g0858 712 MobiDBLite consensus disorder prediction 249 275 - -
Gso11g0858 712 Pfam Domain of unknown function 525 636 IPR026961 -
Gso11g0858 712 Gene3D - 10 241 IPR036770 -
Gso11g0858 712 SUPERFAMILY Ankyrin repeat 22 460 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0858 Gso-Chr11 7666070 7670219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0858 379 653 Miscellaneous Gene Families AT3G12360 24.688 2.34e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0858 - - gmx:100811106 1346.64