Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0848 ATGGCTCTGTGTTCAGTTTTTTTCAATTTTCTTCTTCTGCTTCTTCTTTCTTTCACCAAAGAAGCTTTAGGTGTTTCAGAGCAAGAAGCTGACAGAGTGCATGGACTACCCGGACAGCCTCCGGTGAAGTTCAAACAATATTCTGGTTATATCACTGTCAATGAAACCCATGGAAGAGCACTCTTCTATTGGTTCTTTGAGGCCACTCATAAACCAGAAGAAAAACCTCTTCTCTTATGGCTCAATGGAGGCCCTGGTTGTTCCTCAATTGGTTATGGAGAAGCAGAGGAGCTAGGACCCTTCTTTCCTCAGGACAGCAGCCAACCAAAGCTAAAGTTAAATCCTTATTCTTGGAATAACGCTGCCAATCTTTTGTTTTTGGAATCCCCTGTTGGGGTGGGGTTCTCCTACACCAACACCAGCAGTGATATAAGTGAGCTTGGTGACACCATTACCGCTAAAGATTCACACACCTTTATCATCAAGTGGTTTAGAAGATTTCCACAATTCAGATCACACGAATTCTACATTTCCGGTGAAAGCTATGCAGGGCACTATGTTCCGCAACTTTCAGAGCTCATTTTCGATAATAATCGCAATCCTGTCGAGAAAGACTACATTAACTTCAAAGGATTCCTGATTGGAAATGCATTACTGGACGACGAAACAGATCAAAAGGGTATGATAGATTATGCATGGGATCATGCTGTGATATCTGATGGAGTATACCATAACATTACAACCATATGCGATTTCAGCCTTCCAATTCTAAATCAAACAAATGAGTGCAATGTGGAACTCAATAAGTACTTCGCTGTGTATAAGATTATTGATATGTATAGCTTGTACACTCCCAGATGTTTCAGCAACACCAGCAGCACCAGAAAGGAAGCCCTTCAAAGTTTTTCAAAAATTGATGGGTGGCACAGAAAATCAGCTGGATATGATCCTTGTGCATCCGATTATACTGAAGCGTACCTAAATAGGCCAGAAGTCCAAAAGGCATTACATGCCAATGTCACCAAAATTCCATATCCATGGACTCATTGCAGCGATAATATCACATTTTGGAATGACTCACCACAGTCCATGCTTCCTGTCATCAAGAAGCTTATTGCTGGTGGTATTCGCATTTGGGTTTACAGTGGAGATACCGATGGAAGAATTCCCGTGACTTCAACAAGATACACTCTTAGAAAGTTGGGGCTTGGGATCGTCGAAGATTGGACTCCCTGGTATACCAGCAAGCAGGTGGGAGGATGGACCATTGCTTACGATGGACTTACTTTTGTTACCATAAGAGGTGCTGGTCATCAAGTTCCTACTTTCACACCCAAGCAAGCTCTGCAGTTGGTTCGACACTTCCTAGCAAATAAGAAATTACCATCTCAACCAATTTAA 1401 0.4211 MALCSVFFNFLLLLLLSFTKEALGVSEQEADRVHGLPGQPPVKFKQYSGYITVNETHGRALFYWFFEATHKPEEKPLLLWLNGGPGCSSIGYGEAEELGPFFPQDSSQPKLKLNPYSWNNAANLLFLESPVGVGFSYTNTSSDISELGDTITAKDSHTFIIKWFRRFPQFRSHEFYISGESYAGHYVPQLSELIFDNNRNPVEKDYINFKGFLIGNALLDDETDQKGMIDYAWDHAVISDGVYHNITTICDFSLPILNQTNECNVELNKYFAVYKIIDMYSLYTPRCFSNTSSTRKEALQSFSKIDGWHRKSAGYDPCASDYTEAYLNRPEVQKALHANVTKIPYPWTHCSDNITFWNDSPQSMLPVIKKLIAGGIRIWVYSGDTDGRIPVTSTRYTLRKLGLGIVEDWTPWYTSKQVGGWTIAYDGLTFVTIRGAGHQVPTFTPKQALQLVRHFLANKKLPSQPI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0848 466 Gene3D - 364 457 - -
Gso11g0848 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 21 465 IPR001563 GO:0004185|GO:0006508
Gso11g0848 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 428 445 IPR033124 GO:0004185
Gso11g0848 466 SUPERFAMILY alpha/beta-Hydrolases 28 461 IPR029058 -
Gso11g0848 466 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Gso11g0848 466 ProSitePatterns Serine carboxypeptidases, serine active site. 177 184 IPR018202 GO:0004185
Gso11g0848 466 PANTHER CARBOXYPEPTIDASE 21 465 - -
Gso11g0848 466 Gene3D - 318 355 - -
Gso11g0848 466 Pfam Serine carboxypeptidase 37 458 IPR001563 GO:0004185|GO:0006508
Gso11g0848 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Gso11g0848 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Gso11g0848 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 163 188 IPR001563 GO:0004185|GO:0006508
Gso11g0848 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0848 Gso-Chr11 7586831 7594971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0848 326 461 Calmodulin-binding Proteins AT2G22960 29.197 4.89e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0848 K16297 - gmx:100781503 953.74