Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0834 ATGGGAAATGAAGGTATTATGAATGGTGTTACCCCCGGGAAGGCTACCATATTAGCTCTTGGCAAGGCTTTCCCTCATCAGCTTGTCATGCAAGAGTATTTAGTTGATGGATATTTCAGGGACACAAACTGTGACAGTCCTGAACTCAAGCAGAAGCTCACTAGACTTTGCAAGACAACCACAGTGAAAACAAGGTATGTGGTAATGTCAGAGGAGATACTGAAAAAGTATCCAGAACTTGCGGCTGAAGGCATCCCCACAGTAAAGCAACGACTAGAGATATGCAATGAGGCAGTGACAGAAATGGCCATTGAAGCTTCCCAAGCTTGCATCAACAACTGGGGTGGATCTTTATCAGACATAACACACTTAGTTTATGTGTCATCCAGTGAAGCTAGATTACCCGGTGGTGACCTTTACCTAGCCAAAGGACTAGGACTGAGCCCTGATACTCAACGAGTCATGCTCTATTTTGCTGGTTGTTCGGGAGGCGTGGCCGGCTTACGTGTTGCGAAAGACATAGCTGAGAACAACCCTGGAAGCCGAGTGCTGATTGCTACCTCAGAAACTACAATTATTGGGTTCAAGCCACCAAGTGCAGATAGACCTTATGATCTAGTTGGGGTGGCACTCTTTGGGGATGGTGCTGGTGCAATGATAATTGGCTCAGACCCAATATTGGAGTCTGAGAAGCCTCTCTTTGAGCTTCACACTGCAGTTCAGGAGTTTTTGCCACACACTGAGAAGAAAATAGATGGGAGGCTGACAGAAGAAGGAATAAGCTTCAAGTTAGCAAGGGAACTTCCTCAAATAATTGAAGACAATGTTGAAGGATTCTGTGACAAGTTAATAAGTGTTGTTGGGTTTGAGAACAAGGAGTACAACAAGATGTTTTGGGCTGTTCATCCGGGGGGTCCTGCCATCTTGAACCGCATTGAAAAGAGGCTTGATTTGTTGCCAGAGAAGCTGAGTGCAAGTAGAAGGGCTCTCATGGATTATGGCAATGCTAGCAGTAACACCATTGTGTATGTGCTTGAGTATATGATAGAGGAAGGTCTCAAGATTAGAAAGGATGCCAGAGGAGATCTTGAATGGGGCTTAATACTTGCTTTTGGACCAGGGATTACATTTGAGGGAATTCTTGCCAGGAACTTGTGTGCTTGA 1164 0.451 MGNEGIMNGVTPGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDSPELKQKLTRLCKTTTVKTRYVVMSEEILKKYPELAAEGIPTVKQRLEICNEAVTEMAIEASQACINNWGGSLSDITHLVYVSSSEARLPGGDLYLAKGLGLSPDTQRVMLYFAGCSGGVAGLRVAKDIAENNPGSRVLIATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPILESEKPLFELHTAVQEFLPHTEKKIDGRLTEEGISFKLARELPQIIEDNVEGFCDKLISVVGFENKEYNKMFWAVHPGGPAILNRIEKRLDLLPEKLSASRRALMDYGNASSNTIVYVLEYMIEEGLKIRKDARGDLEWGLILAFGPGITFEGILARNLCA* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0834 387 Pfam Chalcone and stilbene synthases, C-terminal domain 235 385 IPR012328 -
Gso11g0834 387 CDD CHS_like 15 381 - -
Gso11g0834 387 SUPERFAMILY Thiolase-like 232 383 IPR016039 GO:0016746
Gso11g0834 387 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 8 385 IPR011141 GO:0009058|GO:0016747
Gso11g0834 387 SUPERFAMILY Thiolase-like 12 225 IPR016039 GO:0016746
Gso11g0834 387 PIRSF PKS_III 5 386 IPR011141 GO:0009058|GO:0016747
Gso11g0834 387 Gene3D - 7 232 IPR016039 GO:0016746
Gso11g0834 387 PANTHER BNAA09G41780D PROTEIN 8 385 - -
Gso11g0834 387 Pfam Chalcone and stilbene synthases, N-terminal domain 10 225 IPR001099 -
Gso11g0834 387 Gene3D - 233 384 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0834 Gso-Chr11 7486308 7487988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0834 83 372 Miscellaneous Gene Families AT4G34250 24.922 1.86e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0834 - - vun:114168705 717.227