Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0793 ATGGCTTCTGTTCTGCCTATTTACCACAACTACGTTAACCTCCCATGTCCTCTTCCCCTTTCAAAACCATCCACCACCTTCAACACACCCATAATTCTCTTCTTCCCAAAAACCAAACCTTCACTAACCCTCAAGTGCTCCTCTTCCGCTTCAAGCCTAACCCCGGAACTGGACCAAGAAGAAGAAACATTTGGTAACTTTGATGAGCCTCCCTTGAGCGAATCGTGGAAGGAAATCCAAGGCTTGAACAACTGGGATGGTCTCATAGACCCAACCATGAACCCTCACCTCCGAAGAGAAATAATCCGCTACGGCGAACTCGCCCAAGCATGCTACGACTCCTTCGACTTCGACCCTCACTCCAAGTACTGCGGAACATGCAAGTACCACCCTTCACAGTTGTTCGAGAAACTCAACATGTCCCAAACCGGCTACATGATAAGCCGGTACCTCTACGCCACCTCCAATGTCAACCTCCCCAACTTCTTCCAGAAGTCCAGGCTCTCCACCAGCGTCTGGTCCCCACACGCCAACTGGATGGGCTACGTGGCAGTCTCCACCGACAGGGACCAAATCAAACGCCTCGGACGCCGCGACATCGTCATTGCATGGCGAGGAACCGTCACCTACGTCGAATGGATCTACGACCTCAAAGACATTCTCCGTCCAGCGCTCTTCTCCGACGACCCCACCATCAAAGTCGAATCAGGCTTCTACGACTTGTACACCAAAAAAGAAGATTCATGCACCTATTGCTCTTTCTCCGCTCGCGAACAAGTACTCTCGGAAGTCAAGCGTCTTCTCCATTATTACAAAAACGAAGAGATCAGTATTACCATCACAGGACACAGCCTCGGTGCTGCCTTGGCGATTCTGAGCGCTTACGACATCGCTGAACTCAAGTTAAACGTTGTTGAAGACGGTCGTAACAAAATTCCTGTGACTGTGTTTTCGTTTGCGGGGCCGAGGGTTGGGAATCTGAAGTTCAAGGAGAGGTGCGAGGAGCTAGGGGTGAAGGTGCTGAGGGTGGTGAACGTGCAGGACGTGGTCCCGACCGTGCCGGGGATAATAACGAACGAGAAGTTTCAGTTCCAGAGGTACATAGAGGAAACGCTGTCGTTTCCGTGGAGCTACGCGCACTTGGGGACGGAGATGGCGTTGGATCACAGGGAGAGTCCGTTTTTAAAAGGAGGGATGAATGATTTGGGGTGCGCGCATAACTTGGAGGTGCATTTGCACTTGGTGGATGGGTACCATGGGAAGGGGAAGAGGTTCTGTTTGGCAACCAAGAGGGACATAGCGCTTGTGAACAAGAGCTGCGATTTTCTCAGGAGTGAGTACGGTGTTCCCTCGCATTGGCGCCAGGATGAGAATAAGGGGATGGTCAGGAGCCGAGATGGCCGCTGGGTTCTGCCGGACCGCCCAATATTGGAGGCTCATCCGCCGGACATGGCGCACCATCTGCAGCAGGTCCTCAACAACCACTTAGCAGCTCAGCAATTCGAAACCAGTACTTGA 1518 0.5231 MASVLPIYHNYVNLPCPLPLSKPSTTFNTPIILFFPKTKPSLTLKCSSSASSLTPELDQEEETFGNFDEPPLSESWKEIQGLNNWDGLIDPTMNPHLRREIIRYGELAQACYDSFDFDPHSKYCGTCKYHPSQLFEKLNMSQTGYMISRYLYATSNVNLPNFFQKSRLSTSVWSPHANWMGYVAVSTDRDQIKRLGRRDIVIAWRGTVTYVEWIYDLKDILRPALFSDDPTIKVESGFYDLYTKKEDSCTYCSFSAREQVLSEVKRLLHYYKNEEISITITGHSLGAALAILSAYDIAELKLNVVEDGRNKIPVTVFSFAGPRVGNLKFKERCEELGVKVLRVVNVQDVVPTVPGIITNEKFQFQRYIEETLSFPWSYAHLGTEMALDHRESPFLKGGMNDLGCAHNLEVHLHLVDGYHGKGKRFCLATKRDIALVNKSCDFLRSEYGVPSHWRQDENKGMVRSRDGRWVLPDRPILEAHPPDMAHHLQQVLNNHLAAQQFETST* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0793 505 Gene3D alpha/beta hydrolase 75 481 IPR029058 -
Gso11g0793 505 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 59 493 - -
Gso11g0793 505 CDD Lipase_3 150 390 - -
Gso11g0793 505 PANTHER PHOSPHOLIPASE A1-IGAMMA3, CHLOROPLASTIC 59 493 - -
Gso11g0793 505 Pfam Lipase (class 3) 201 356 IPR002921 GO:0006629
Gso11g0793 505 SUPERFAMILY alpha/beta-Hydrolases 99 419 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0793 Gso-Chr11 7118986 7120918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0793 72 492 Acyl Lipid Metabolism Gene Families AT1G51440 74.246 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0793 - - gmx:100795661 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0793 11 7118986 7120918 Gso11g0793 11 7118986 7120918 ECH