Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0764 ATGGCATCTGCTAGGGTTTTCGGAGCGATCGCCGGGAGAGCGTTCATGGCCGCGGCGTCGAAGAGTTCGGCCAAGAAGAAACCCGTTCCGTCCGGCGGAGCCGCTGCAAAAGCCGCCGTGAAAAAGCCGGCCGCGCCTAGGACCACCAACTCCGGCATACAGAAGGTGGTTCCGGTGTCTTCCGAGCTCGGAGACTTCCTCGGCGCTCCTCAAGTGTCGCGAACCGACGCCGTCAAGAAAGTCTGGGCCTACATCAAGCTGCAGAATCTTCAGAATCCAGCAAATAAGAAGGAGATCTTTTGTGATGAAAAGCTGAAGACCATTTTTGAGGGGAAAGATAAGGTTGGGTTCACAGAGATTGCTAAATTGCTGTCTAGCCATTTTGTGAAATCTGGCTGA 399 0.5414 MASARVFGAIAGRAFMAAASKSSAKKKPVPSGGAAAKAAVKKPAAPRTTNSGIQKVVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKVGFTEIAKLLSSHFVKSG* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0764 132 Gene3D SWIB/MDM2 domain 47 132 IPR036885 -
Gso11g0764 132 SMART swib_2 53 132 IPR019835 -
Gso11g0764 132 ProSiteProfiles SWIB/MDM2 domain profile. 52 130 IPR003121 -
Gso11g0764 132 Pfam SWIB/MDM2 domain 57 128 IPR003121 -
Gso11g0764 132 CDD SWIB-MDM2_like 57 128 - -
Gso11g0764 132 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 2 131 - -
Gso11g0764 132 PANTHER PROTEIN TRI1 2 131 - -
Gso11g0764 132 SUPERFAMILY SWIB/MDM2 domain 48 130 IPR036885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0764 Gso-Chr11 6892218 6894123 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Gso11g0764 SWIB 4.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0764 - K15223 gmx:100795307 201.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1314 1 49673224 49675088 Gso11g0764 11 6892218 6894123 GST