Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0745 ATGGAAGTTCGCCGGCGAGTCCTCCGTCCCGCTCCCGCCGGCGAACCTTTGAAGCCCAAACAGGACCCTAACTCCCAACAGCAGCAGCAGCCACAGCAATCGTACCTCACCAACGCCGTGTTCTTCGGGCTGTTCTTCTCGGTGGCGTACTTCCTCCTCCACCGATGGCGCGAGAAGATCCGCACCTCCACTCCCCTTCACGTCGTCACGCTCTCCGAGATGGCCGCCATCGTCTCCCTCATCGCCTCCGTCGTCTACCTCATGGCCTTCTTCGGCATTACCTTCATCCTCCACCCATTCCTTAATTCCCGTTCTTCTCCTGACGATGACATCGACCTCGACATTCCCAAATTACCTGTCCCCACTCCCTGCCCCGCTGCCCTTCCTCCAAAACTCCCTCCTCCCCCACTCCCTCACCACGACGAGGACATCGTCCTCGCCGTCGTGTCCGGCTCCATCCCCTCCTACTCGCTGGAATCGCGGCTCGGCGATTCCCACCGAGCCGCGTCAATTCGGCGCGAGGCGGTGGAGCGTATCACCGGGAGGTCTATCCAAGGCCTCCCCGTGGAAGGCTTTGATTATGACTCCATTCTAGGGCAGTGCTGTGAGATGCCGATTGGGTTCGTGCAGATCCCGGTCGGCGTCGCGGGTCCCTTGCTTCTCGACGGAAAGGAGTACACTGTTCCAATGGCCACCACGGAAGGTTGCTTGGTCGCTAGCACCAACAGAGGCTGCAAGGCCATTCATGTTTCTGGCGGAGCTTCCTCCATGCTCCTCCGTGATGCCATGACCAGAGCCCCCGTGGTTAGGTTCAACTCTGCAAAACGTGCTTCTCAGCTTAAGTTCTACCTCGAAGACCCTCTTAATTTCGATTCCCTTGCCGTCGTTTTCAACAAGTCAAGCAGGTTTGCGAGATTGCAAGATATTAAGGCTGCAATAGCAGGGAAGAATTTGTACATTAGATTCAGTTGCACTACCGGGGATGCCATGGGGATGAACATGGTCTCCAAAGGAGTCCAAAACGTGCTTACTTTTCTCCAGAGTGATTTTCCAGATATGGATGTTATTGGGATATCTGGGAATTTCTGTTCGGATAAGAAGGCTGCGGCGGTGAACTGGATTGAGGGGAGAGGGAAATCGGTGGTGTGCGAGGCTGTAATTAAGGAGGAGGTGGTTAAGAAAGTGTTGAAGACCAGCGTGGAGGCTTTGGTTGAGCTTAACATGTTGAAAAACCTTACTGGGTCTGCTATGGCTGGTGCTCTTGGTGGCTTCAATGCTCATGCTAGTAACATTGTTTCTGCTGTTTACTTGGCCACTGGACAGGACCCTGCTCAGAATGTGGAGAGTTCTCACTGCATAACTATGATGGAAGCTGTGAATGATGGCAAGGACCTTCACATCTCTGTTACTATGCCTTCCATTGAGGTGGGTACAGTTGGAGGGGGCACACAACTTGCGTCTCAGTCAGCATGCCTTAATTTATTAGGAGTAAAGGGTGCGAGCAAAGAGTCCCCAGGTGCAAATTCTAGGTTACTAGCAACCATAGTAGCAGGTTCAGTCCTAGCAGGGGAACTCTCACTCATGTCTGCAATTGCAGCAGGCCAACTTGTTAATAGCCACATGAAATACAACAGATCTAGCAAGGATATCACCAAAATTGCCTCCTAG 1668 0.5324 MEVRRRVLRPAPAGEPLKPKQDPNSQQQQQPQQSYLTNAVFFGLFFSVAYFLLHRWREKIRTSTPLHVVTLSEMAAIVSLIASVVYLMAFFGITFILHPFLNSRSSPDDDIDLDIPKLPVPTPCPAALPPKLPPPPLPHHDEDIVLAVVSGSIPSYSLESRLGDSHRAASIRREAVERITGRSIQGLPVEGFDYDSILGQCCEMPIGFVQIPVGVAGPLLLDGKEYTVPMATTEGCLVASTNRGCKAIHVSGGASSMLLRDAMTRAPVVRFNSAKRASQLKFYLEDPLNFDSLAVVFNKSSRFARLQDIKAAIAGKNLYIRFSCTTGDAMGMNMVSKGVQNVLTFLQSDFPDMDVIGISGNFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVKKVLKTSVEALVELNMLKNLTGSAMAGALGGFNAHASNIVSAVYLATGQDPAQNVESSHCITMMEAVNDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGANSRLLATIVAGSVLAGELSLMSAIAAGQLVNSHMKYNRSSKDITKIAS* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0745 555 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 141 545 IPR002202 GO:0004420|GO:0015936
Gso11g0745 555 MobiDBLite consensus disorder prediction 1 30 - -
Gso11g0745 555 Gene3D - 212 540 IPR023074 GO:0004420
Gso11g0745 555 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 263 378 IPR009023 -
Gso11g0745 555 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 530 543 IPR023076 GO:0004420
Gso11g0745 555 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 321 335 IPR023076 GO:0004420
Gso11g0745 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 201 222 IPR002202 GO:0004420|GO:0015936
Gso11g0745 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 228 248 IPR002202 GO:0004420|GO:0015936
Gso11g0745 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 319 337 IPR002202 GO:0004420|GO:0015936
Gso11g0745 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 359 384 IPR002202 GO:0004420|GO:0015936
Gso11g0745 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 410 436 IPR002202 GO:0004420|GO:0015936
Gso11g0745 555 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 464 485 IPR002202 GO:0004420|GO:0015936
Gso11g0745 555 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE 24 128 - -
Gso11g0745 555 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A REDUCTASE 133 554 - -
Gso11g0745 555 CDD HMG-CoA_reductase_classI 142 545 IPR004554 GO:0004420|GO:0005515|GO:0008299
Gso11g0745 555 Pfam Hydroxymethylglutaryl-coenzyme A reductase 169 545 IPR002202 GO:0004420|GO:0015936
Gso11g0745 555 Gene3D - 262 378 IPR009023 -
Gso11g0745 555 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 138 534 IPR009029 GO:0015936|GO:0016616
Gso11g0745 555 TIGRFAM HMG_CoA_R_NADP: hydroxymethylglutaryl-CoA reductase (NADPH) 142 545 IPR004554 GO:0004420|GO:0005515|GO:0008299
Gso11g0745 555 Gene3D - 138 211 IPR023282 GO:0004420
Gso11g0745 555 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 476 483 IPR023076 GO:0004420
Gso11g0745 555 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 24 128 IPR002202 GO:0004420|GO:0015936
Gso11g0745 555 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 133 554 IPR002202 GO:0004420|GO:0015936
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0745 Gso-Chr11 6685440 6689527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0745 4 551 Lipid Metabolism Gene Families AT1G76490 72.500 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0745 K00021 - gmx:100790033 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0745 11 6685440 6689527 Gso11g0745 11 6685440 6689527 ECH
Gso1g1335 1 49939347 49943955 Gso11g0745 11 6685440 6689527 GST