Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0716 ATGATGGATACTCACGCAGAAGATTCTGCTAGACCTGAGGAGAATTTGCCTGATGTGACTCATCATAATGAAGATGGAAGCAACAGAAATCTTATATTGGAAAATGGTTTGTCTGATAGCGATCAAGGTCCTGCTGATACTCACGATCAGCTTTTACAAATGGTTATGGACCTCAGGTTTCAGAATGACTTCTTGAAGTCCCAGTTTGAGGGATTTAAAAATGTAGACAGTGTACCTAGTGACTCTAGTATACAGAAAGGAGTTGGTGGCTCTGAAGATGGGGAATCTGATATTGTGAAAGAATTAAAGGAAAAGATACAATTGTTAAATAAAGAATTTCTGGAAGAAAAACAAACAAGAATTGCATCAGAAGAGGCCTTGAAGCATCTTCAAACGGCTTACTCGGAGGCAGAAGCAAAGGCCCAAGAGCTCTCTGAAAAGCTTGCAGAAGCTCGAACGAAGTTAGACCAAGAAGTAAAAGAGCGTGAAGAGAAGTACTCTGAACTTGACTCCAAGTTTAATAGGCTTCACAAACGAGCAAAACAGCGCATTCAAGAAGTTCAAAAGGAAAAAGATGATCTTGAGGCCCGCTTCTCTGAGGTAAATGAAATTGCAGAGCGAGCATCATCCCAACAGTCAGCATTGCAACAAGAATTAGAGCGCACTAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATAGTGATAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAGGCGTTCATTGCAACCTAAAGAGAATGCTATTGAGGCATTGCAACAGTCAATTGCAGAAAAGGAACAGATGTTGGAAGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCTGCTCTAGCTGAGCTCTCAGCTAAACATCAAAAGAATATCGAGAGTTTGGAGGCTCAAATTAATGATGCATTGTCCGACAGAAGTAAGGCAACTGAATCCATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACAGGAGAAGCCGCACGACTCAGAGCAGCTGTGGAAAGTGTGAAAGGGGAGCTTTCTCACATAAAAGAGGAGCATGAAAACGAAAGGGAAAGCTGGGAGACTGCAACTCAGGCACTTAAAGCAAAACTTGAAATTGCAGAGAGCAACTGCATACGTGCAGAAGTTGAAGTAGCAAAAATAAGAAGTCAGCTGGAATCAGAGGTATCCACACAAACAAGAATCCTCAATATGAGAGATGCTGAATTGTTGGCTGCCAAAGAAGAGATCAGCTCTCTTGAGAAGGAATTTTCTTCATACAAAGTTCGTGCACATGCACTTCTTCAAAAGAAGGATGCTGAACTGGCTGCTGCTAAAGATTCTGAACAACTCAAAGATCTAGAGGAAACTCTGAAAGAGGTGGAAAATGAAGTATTATCAATAACAGAAGAAAGGGATAGAGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAAGAGCTTGCAGAAAGAGACACAGCCCTTGAAAATGTCAAGCAACAGATAAGGAGCTTAGAAATAAAGCTTGACTCAGCTAATGCTAAACACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTACAAGAAACATGGAGAATCAGATGCGAGGCAATGAAGGCTGAAAATGAAGCAACTGCTACAAAAGATATGCAAAAGGAATTGGAAGAGCTCAAACAGCGATGTAAAAAACTGAAGGAAGAGCATGCTTCATTTCATGATCTTGCGGATAGAATGATTGAGGAGAAAGACTATGAAATATCCAGACTTTTAGATGAAAATAAGAATCTTCGTCAGTCTCTTCAATCAAGACCATCAGTCGATCAGAATGATAATTATACAACAGCCTTGCATAAATTGGATGCAACAAATTTAAGCCCCTCCGAAGCAGAGCAGCAAATTCTGATTTTGGCTAGACAACAAGCCCAAAGAGAGGAAGAGCTAGCACAGTCACAGCGCCATATTTTAGCTCTTCAAGAAGAAATTGAGGAGCTTGAACGTGAGAATCGTCTCCACAGCCAACAGGAGGCAATGTTAAAGGATGAGCTTCGCAATATGGAAAGATCAAAGAAAAGGGAAGGTGTTGATATGACATATTTGAAAAATGTTATCTTAAAGCTGCTTGAGACTGGTGAAGTTGAGGTATTGCTACCAGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATACAGAAGTGTCAACAGGCATATCACAACTCAACAGATGTTCCACCAAATCCTGCAAGCGATACTTCAGGATCTGGCCTATCGCTTTTCTCAAGATTCACATTTTCTTAG 2379 0.4069 MMDTHAEDSARPEENLPDVTHHNEDGSNRNLILENGLSDSDQGPADTHDQLLQMVMDLRFQNDFLKSQFEGFKNVDSVPSDSSIQKGVGGSEDGESDIVKELKEKIQLLNKEFLEEKQTRIASEEALKHLQTAYSEAEAKAQELSEKLAEARTKLDQEVKEREEKYSELDSKFNRLHKRAKQRIQEVQKEKDDLEARFSEVNEIAERASSQQSALQQELERTRKQANEALKAMDSDRQQLRSANNNLRDTIEDLRRSLQPKENAIEALQQSIAEKEQMLEDMRGLLQAAEEKRQAALAELSAKHQKNIESLEAQINDALSDRSKATESISSLQVLVAEKESRIAEMEAASTGEAARLRAAVESVKGELSHIKEEHENERESWETATQALKAKLEIAESNCIRAEVEVAKIRSQLESEVSTQTRILNMRDAELLAAKEEISSLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLKDLEETLKEVENEVLSITEERDRVLQDLQSAMANHEKELAERDTALENVKQQIRSLEIKLDSANAKHLKEKEEWGLSLQNVQETWRIRCEAMKAENEATATKDMQKELEELKQRCKKLKEEHASFHDLADRMIEEKDYEISRLLDENKNLRQSLQSRPSVDQNDNYTTALHKLDATNLSPSEAEQQILILARQQAQREEELAQSQRHILALQEEIEELERENRLHSQQEAMLKDELRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEIQKCQQAYHNSTDVPPNPASDTSGSGLSLFSRFTFS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0716 792 Coils Coil 354 413 - -
Gso11g0716 792 SMART 1grip 719 763 IPR000237 -
Gso11g0716 792 Coils Coil 177 349 - -
Gso11g0716 792 Coils Coil 667 708 - -
Gso11g0716 792 Coils Coil 127 172 - -
Gso11g0716 792 Coils Coil 459 546 - -
Gso11g0716 792 MobiDBLite consensus disorder prediction 1 28 - -
Gso11g0716 792 Coils Coil 564 601 - -
Gso11g0716 792 Coils Coil 425 452 - -
Gso11g0716 792 Coils Coil 99 119 - -
Gso11g0716 792 ProSiteProfiles GRIP domain profile. 716 763 IPR000237 -
Gso11g0716 792 MobiDBLite consensus disorder prediction 29 46 - -
Gso11g0716 792 Coils Coil 606 626 - -
Gso11g0716 792 MobiDBLite consensus disorder prediction 1 46 - -
Gso11g0716 792 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 52 769 - -
Gso11g0716 792 Pfam GRIP domain 720 759 IPR000237 -
Gso11g0716 792 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 52 769 - -
Gso11g0716 792 Gene3D - 155 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0716 Gso-Chr11 6368330 6378398 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0716 - - gmx:100775990 1477.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0716 11 6368330 6378398 Gso11g0716 11 6368330 6378398 ECH
Gso1g1368 1 50366007 50375903 Gso11g0716 11 6368330 6378398 GST