Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0670 ATGATGTTGGACGGAACCGAAGACGAAGAGAAGTTTCTCGCCGCCGGAATCGCCGGCCTTCAGCAGAATTCCTTCTACATGCACCGTGCATTGGACTCGAACAATCTCAGGGATGCTTTGAAGTATTCGGCTCAGATGCTCTCCGAGCTCAGGACTTCCAAGCTTTCTCCTCACAAGTACTACGAACTATACATGCGCGCCTTTGATCAGTTAAGGAAGCTGGAGATGTTCTTTGAGGAAGAGACTCGTCGCGGTTGCTCCATTATTGATCTTTATGAACTCGTCCAGCACGCCGGCAACATTTTGCCCCGATTGTACCTCCTCTGTACAGTAGGATCAGTATACATCAAATCCAAGGAAGCTCCTGCAAAGGATGTTCTTAAGGATCTTGTGGAGATGTGCCGTGGCATTCAGCACCCTGTTCGCGGACTCTTTCTCAGAAGTTACCTTTCTCAAGTTAGCAGGGACAAATTGCCAGATATTGGTTCAGAGTACGAAGGGGATGCAGATACTGTAGCAGATGCTGTAGAGTTCGTGCTCCAAAATTTCACTGAAATGAACAAACTTTGGGTGCGAATGCAACATCAGGGGCCTGCCCGGGAGAAGGAGAAACGGGAAAAGGAAAGGAGCGAGTTGCGCGATCTTGTTGGCAAGAATCTTCATGTTCTCAGTCAGATAGAGGGTGTTGACCTAGATATGTACAAAGATGTTGTGCTTCCCAGAGTACTGGAGCAGGTTGTGAATTGCAAAGATGAGTTAGCTCAGTTCTACTTGATGGATTGTATAATTCAAGTCTTCCCTGATGAGTATCACTTGCAAACTCTTGATGTTTTGTTGGGTGCTTACCCCCAACTTCAGCCATCTGTGGACATCAAGACAGTACTGTCCCAGTTAATGGAAAGGCTTTCAAATTATGCTGCTTCAAGTGCAGACGTGTTGCCAGAGTTTTTACAAGTGGAAGCATTTTCCAAATTAAGCAATGCCATTGGCAAGGTGATAGAGGCACAGCCTGACATGCCCACTGTTGGAGTTGTAACTTTATATTCGTCCCTTCTCACCTTCACTCTTCATGTCCACCCTGATCGACTTGATTATGCAGATCAAGTTTTGGGAGCATGTGTGAAAAAACTCTCTGGCAAGGGGAAAATTGAGGACAACAGGGCAACTAAGCAGATTGTTGCTCTATTAAGTGCTCCGCTAGAGAAATATAATGATATTATGATTGCATTGAAGCTTTCAAATTATCCTCGCGTAATAGAATACGTTGATATTCGAACTACTAAGGTCATGGCAACTGTCATTATTCAAAGCATTATGAAAAACGGAACACGCATTTCTACTTCAGAAAAGGTTGAAGCATTGTTTGAACTGATAAAGGGGCTTATCAAGGATTCTGATGGGATCCCTAATGATGAGCTGGATGAAGATGATTTCAAAGAGGAGCAGAACTCTGTTTCCCGTCTAATCCAGATGCTTTATAATGATGATCCAGAAGAAATGTTTAAGATCATTGATACTGTGAGGAAGCACATACTGACTGGAGGACCAAAACGTCTGCCTTTCACTGTTCCACCTCTTGTTTTTTCTTCTTTAAAGTTGGTCAGACAGTTGCAAGGTCAAGAAGAAAATCCATTTGGAGATGATGCATCAACAACACCAAAGAAAATTTTTCAGCTTTTAAATCAGACCATCGAGACTTTGTCAGGTGTCCTGGCGCCAGAATTAGCATTGCAGTTGTACTTGCAATGTGCTGAGGCTGCAAATGACTGTGAATTGGAGCCTGTTGCTTATGAATTTTTCACCCAAGCTTATATTCTATATGAAGAAGAAATTTCTGATTCCAGAGCACAGATCACAGCTATCCATTTAATAATAGGGACTCTTCAAAGGATGCACGTCTTTGGTGTTGAAAACAGGGATACTTTAACCCACAAGGCCACAGGGTATTCAGCAAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCTGTGTATGCATGCTCACATCTGTTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGGGTCCTATTATGTCTTAAGCGGGCTTTAAGAATTGCAAATGCAGCCCAACAAATGGCAAATGCAGCACGAGGTAGCACCGGATCAGTAATGCTCTTCATTGAGATATTGAACAAGTATCTTTACTTCTTTGAGAAGGGAAACCTACAAGTCACCGTTGCGGCTATCCAGGGCTTAATTGAGTTAATTATGAATGAAATGCAGAGCGACACCACAACTCCAGATCCAGCTGCCAATGCTTTCTTAGCCAGTACTATGCGGTATATAGAGTTCCAAAAACAAAAAGGCGGTGCGGTAGGTGAGAAGTATGAAGCCATCAAGGTTTCACATGCTGGATAA 2385 0.4323 MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVADAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDVVLPRVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQPSVDIKTVLSQLMERLSNYAASSADVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTVGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKKLSGKGKIEDNRATKQIVALLSAPLEKYNDIMIALKLSNYPRVIEYVDIRTTKVMATVIIQSIMKNGTRISTSEKVEALFELIKGLIKDSDGIPNDELDEDDFKEEQNSVSRLIQMLYNDDPEEMFKIIDTVRKHILTGGPKRLPFTVPPLVFSSLKLVRQLQGQEENPFGDDASTTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCELEPVAYEFFTQAYILYEEEISDSRAQITAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILNKYLYFFEKGNLQVTVAAIQGLIELIMNEMQSDTTTPDPAANAFLASTMRYIEFQKQKGGAVGEKYEAIKVSHAG* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0670 794 Pfam Vacuolar protein sorting-associated protein 35 13 747 IPR005378 GO:0015031|GO:0030906|GO:0042147
Gso11g0670 794 SUPERFAMILY ARM repeat 459 748 IPR016024 -
Gso11g0670 794 Gene3D - 466 775 IPR042491 -
Gso11g0670 794 PIRSF Retromer_Vps35 2 793 IPR005378 GO:0015031|GO:0030906|GO:0042147
Gso11g0670 794 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 35A 2 790 - -
Gso11g0670 794 PANTHER VACUOLAR SORTING PROTEIN 35 2 790 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0670 Gso-Chr11 5988332 5997312 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0670 K18468 - gmx:100809289 1542.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0670 11 5988332 5997312 Gso11g0670 11 5988332 5997312 ECH