Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0656 ATGGCTCTGTTTTCACATCACCGACACTCTTATGAAACGCTCTTGGGCTTTCTACTCTTCCTCGTATTCAGAGAGGTTTCAGGGGCAACATTTACCTTCGTGAATAAGTGCGATCACACAGTATGGCCAGGGATTTTAGGAGCACCACAGCTAGGAAGCACAGGTTTTGAACTTGTGAAGGGAGGTTCTAAAAGCTTCCAGGCTCCGACCGGTTGGTCCGGTAGATTCTGGGGCAGAACCGGTTGCCAATTCGACGGTTCGGGAAAAGGAACGTGCGCCACCGCCGACTGCGGCTCCGGCGAGGTCAACTGCAACGGTGCCGGAGCCTCTCCGCCGGCCACGCTCGCCGAGTTCACGCTTGGCAACGGCTCCATGGACTACTACGACGTCAGCCTCGTCGACGGCTACAATCTGCCCATGATGGTGGTGGCCAGAGGCGGCTCGGGCTCCTGCGCCGCCACTGGCTGCGGCGAGGATCTCAACCAACGGTGCCCGTCGGAGCTGAGGGTGGAGGGCGGCGACGCGTGCCAGAGCGCGTGCGGCGCGTTCGGGAAACCGGAGTATTGCTGCAACGGTGCGTTTAGTAACCCCTCCACGTGCAAGCCTTCCATGTACTCGCAAATGTTCAAGTCCGTATGCCCCAAAGCCTATAGCTACGCCTACGATGATGCCACTAGCACCTTCACGTGTTCTGGCGCTGATTACACAATCACATTTTGTCCTTCTTCTCCAAGTTTAAAATCTTCAACGGATTCAAGTCCAAAGGGAATGGATGCAGGGTCTGGGTCTGGGGGAGGTTCATCAGTTGAGCAATCTGAATTAGCTTCTACTTCGTGGTTAGCCGACATGGCAACAGCAACAGGGGCCTCAACACGGACACGGCCTTTTGTTGCTTCGAAGGTCTCTTTTTCGGTGGTGGTTGTTTTCATTCTCTCTCTTTTGGTCGCTTAG 951 0.5542 MALFSHHRHSYETLLGFLLFLVFREVSGATFTFVNKCDHTVWPGILGAPQLGSTGFELVKGGSKSFQAPTGWSGRFWGRTGCQFDGSGKGTCATADCGSGEVNCNGAGASPPATLAEFTLGNGSMDYYDVSLVDGYNLPMMVVARGGSGSCAATGCGEDLNQRCPSELRVEGGDACQSACGAFGKPEYCCNGAFSNPSTCKPSMYSQMFKSVCPKAYSYAYDDATSTFTCSGADYTITFCPSSPSLKSSTDSSPKGMDAGSGSGGGSSVEQSELASTSWLADMATATGASTRTRPFVASKVSFSVVVVFILSLLVA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0656 316 CDD TLP-PA 30 240 - -
Gso11g0656 316 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Gso11g0656 316 ProSiteProfiles Thaumatin family profile. 28 241 IPR001938 -
Gso11g0656 316 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 22 266 - -
Gso11g0656 316 PANTHER OS03G0233200 PROTEIN 22 266 IPR001938 -
Gso11g0656 316 SUPERFAMILY Osmotin, thaumatin-like protein 29 242 IPR037176 -
Gso11g0656 316 MobiDBLite consensus disorder prediction 244 270 - -
Gso11g0656 316 Pfam Thaumatin family 35 241 IPR001938 -
Gso11g0656 316 SMART tha2 31 241 IPR001938 -
Gso11g0656 316 Gene3D Thaumatin 29 241 IPR037176 -
Gso11g0656 316 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Gso11g0656 316 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Gso11g0656 316 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Gso11g0656 316 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Gso11g0656 316 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Gso11g0656 316 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0656 Gso-Chr11 5899912 5902118 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0656 16 245 Receptor kinase-like Gene Family AT5G38280 49.004 3.78e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0656 - - gmx:100802906 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0656 11 5899912 5902118 Gso11g0656 11 5899912 5902118 ECH