Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0643 ATGGACCGCCGGGGTTGGCTCTGGAAGAAAAAATCATCTGATAAAAACATAAAGGTTGAGAATGAGAAACCAATGCCTACATCTGAATCTGTTGGCCCTACCTTGTCTTCTGTGGCACATGCAGGAGATCAGCAAGACAACATCAAAAATAAGAATTATGTTCAAATATCAATGGAATCATACGCACATATGTCTGGATTGGAAGATCAAGTTGTAAACTTGGAGGATCAAGTAAAAGCTTTGGAAGAAAAGCTATCTGCAGTTTATTCAGAATTAAATAACAAGGATAATCTAGTTAAACAGCATGCAAAAGTTGCTGAGGAAGCAGTCTCAGGTTGGGAGAAAGCTGATGCAGAAGTTGTTTCCTTAAGACGTCAACTTGAATCTTTGTCTCTCTCTAAGCTCACTGTTGATGAGAAAGCAGCTCACCTAGATGAAGCCTTAAAAGAGTGCATGAAGCAGATAAGAACTGTAAAGGAAGAAAGTGAGCAGAAACTGCAGGAGGTGATTCTTATGAAATCTCATCAGTGGGAGAAAATCAAGTTAGAACTTGAAGCACAAATAGACAATTTGGATGAAGGACTTCGTGAGTTAGCCAGTGAAAATGCTGCCCTTCTAAGATCAGTTCAAGAAAGTTCGAACAAAATAGTGAAACTAAAAGAAGAGAAGTCTGAAGCAGAGGCAGAGGTAGAGCATCTAGAGAAGAATATTCAGTCAAAGGAAAAAGAAATAACCTCACTAAAGTATGAGCTGCACATGATTTCTAAGGAGATGGATATCCGTAATGAAGAGAAGAATATGATCATGAGATCAGCAGAAGTGGCAAACAAGCAACACACTGAGGATGGCAAGAACATTGACAAGCTAGAAAGTGAGTGTCAACGACTCCGTGGTCTTTTGAGAAAGAAGCTACCTGGGCCTGCTGCATTGGCACAAATGAAGCTAGAAGTTGAGAGTTCACACCATGTCATCAGTGCACCCCATCTGAGAAAAACTAGTTCAAAAACTGATGGCCTGCAAGCATCTGAGTTTCTTACCAAACAATTGAAGGTGTTGGAAGAAGAAACAAAGACATTGAAAGAAGCATTGGCCTCAAGTAATGCTGAGCTGCAGGCTTCTAGGAACTTGTATGCTAAAACGGTTGGCAGACTTAAGCGCTTGGAAGCAGAGATACATCAAGAAAGAAACTCCCAGAAAGCAATGTTGGCAACCAATTATGGAAACCCCTTCAGTAGAGTTTATAGCTATCCACCAAGCATCACTTCTATCTCTGACAATGGGCATGAAGATTCAGAAAGTCATGTTGAGTCATGTGCAACATCAATTCCTGACCATTCTGATATCAGGAGGATTGGAAGTGTAGGTAAATTAGAGAATCATAAGAGTGAAACTATCTCAGAACTGATGGATGACTTTCTGGAAGTGGAGAAGATGGCATGTTTATCAGACAATGGTGGTGTACCTCTTGGCATCATTAGTAAAGCTAATGATGATGCTGAAGATAAAAAGGAGACTAGCTGTTTATCTTCAAATAAAAATTGTTTTGACAGGATAAACCAATCAATAGAACCTGAGGCAGCTGAACATGTCGAGCATATGCAAGATCTTAAGGAAAAAAAGATGATGTTACTGGAAAACATGCAGCTTCTAGAAGAACTTAAAGCTCAATTGGCATCGTCTAATAAATCATGTAGTTTAGGTGAGATTCAACTGAAATGCATGACTGAGTCTTACAGGTCACTTCAAACACGTGTAGAGGTGTTAGAAGCTGAAAATAAGTATTTAAAGGAAAAGATGGATGAGCTAAAGAATGATCTTGCAGAGGAAAAACAAAGTCATCATGATGCTTTGGTGAGGTACAAAGAAATTGAAGAGAAAATGCAAAGGGACAAGTGCTTGGTGTGTGCATCAAACTCAGCAGCAAATTCTGGGAAGGATAAAGAACTAGCAGCTGCAGAGAAAAAGCTGGCAGAATGTCAGGAGACTCTGTCTATACTTGGTAGGCAGTTGCAAGCTATGTGCCCTCAGATAGGTGTAACCATGACTCATCATAGTAAAAGGCTTCAAATGAATGAAAAGTTCGCCAAACCAACTTATGGCTGGTCAAATTCTTATGGTTCATGTAACTCAAATGAAATTGATCGTGCTGAGGCATGTAGCGTAGTGTCTGACATTCAAGGAGTGACTGATGAGTTATCATCGCATAATAACTCTGGTGCCACATCATGTCTTTCAGACACCGAAGGGAACTATTGGTTAAACCCTTGA 2268 0.399 MDRRGWLWKKKSSDKNIKVENEKPMPTSESVGPTLSSVAHAGDQQDNIKNKNYVQISMESYAHMSGLEDQVVNLEDQVKALEEKLSAVYSELNNKDNLVKQHAKVAEEAVSGWEKADAEVVSLRRQLESLSLSKLTVDEKAAHLDEALKECMKQIRTVKEESEQKLQEVILMKSHQWEKIKLELEAQIDNLDEGLRELASENAALLRSVQESSNKIVKLKEEKSEAEAEVEHLEKNIQSKEKEITSLKYELHMISKEMDIRNEEKNMIMRSAEVANKQHTEDGKNIDKLESECQRLRGLLRKKLPGPAALAQMKLEVESSHHVISAPHLRKTSSKTDGLQASEFLTKQLKVLEEETKTLKEALASSNAELQASRNLYAKTVGRLKRLEAEIHQERNSQKAMLATNYGNPFSRVYSYPPSITSISDNGHEDSESHVESCATSIPDHSDIRRIGSVGKLENHKSETISELMDDFLEVEKMACLSDNGGVPLGIISKANDDAEDKKETSCLSSNKNCFDRINQSIEPEAAEHVEHMQDLKEKKMMLLENMQLLEELKAQLASSNKSCSLGEIQLKCMTESYRSLQTRVEVLEAENKYLKEKMDELKNDLAEEKQSHHDALVRYKEIEEKMQRDKCLVCASNSAANSGKDKELAAAEKKLAECQETLSILGRQLQAMCPQIGVTMTHHSKRLQMNEKFAKPTYGWSNSYGSCNSNEIDRAEACSVVSDIQGVTDELSSHNNSGATSCLSDTEGNYWLNP* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0643 755 Coils Coil 181 250 - -
Gso11g0643 755 Coils Coil 141 168 - -
Gso11g0643 755 MobiDBLite consensus disorder prediction 13 42 - -
Gso11g0643 755 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 755 - -
Gso11g0643 755 Coils Coil 533 553 - -
Gso11g0643 755 Coils Coil 342 404 - -
Gso11g0643 755 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 755 - -
Gso11g0643 755 Pfam Filament-like plant protein, long coiled-coil 95 511 IPR008587 -
Gso11g0643 755 Pfam Filament-like plant protein, long coiled-coil 513 676 IPR008587 -
Gso11g0643 755 Coils Coil 571 619 - -
Gso11g0643 755 SUPERFAMILY Tropomyosin 66 262 - -
Gso11g0643 755 MobiDBLite consensus disorder prediction 27 42 - -
Gso11g0643 755 Coils Coil 642 669 - -
Gso11g0643 755 Coils Coil 64 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0643 Gso-Chr11 5732317 5736979 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0643 - - gmx:100803281 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0643 11 5732317 5736979 Gso11g0643 11 5732317 5736979 ECH