Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0603 ATGGTTAAGAAGACAGTCTTGAAGGTTGATATCAGTTGTCTCAAATGCAAAAGGAAGCTCCTCAAAATCGTCTCTTCAATTCAAGGGGTGGATAAAATTGAAGCTGATGAAGGGAAGGGCACGTTGACCGTGACAGGGGATGCAGACCCATATGAAATAATAGTTCGCATAAGGAAAGCTGGCAAACATGCTGAAGTTGTGAGTGTTGGGCCTCCCCAGGCCCCTCAAAAAAAGGATGAGAAGAAGCCCGAAGAAAAGAAGAAGCCCGAGGCAGAGAAGAAAGATGAAAAACCTAAGGAGTCCAGTATCCACATGCCATATTACTATCCTCCTTACCAACCAGTAGTGCTGTACATGAACAGATACGAGGAGCCCAATCCATCTTGCACTATATTGTGA 399 0.4461 MVKKTVLKVDISCLKCKRKLLKIVSSIQGVDKIEADEGKGTLTVTGDADPYEIIVRIRKAGKHAEVVSVGPPQAPQKKDEKKPEEKKKPEAEKKDEKPKESSIHMPYYYPPYQPVVLYMNRYEEPNPSCTIL* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0603 132 ProSiteProfiles Heavy-metal-associated domain profile. 11 66 IPR006121 GO:0046872
Gso11g0603 132 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 131 - -
Gso11g0603 132 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
Gso11g0603 132 CDD HMA 6 65 IPR006121 GO:0046872
Gso11g0603 132 Pfam Heavy-metal-associated domain 7 63 IPR006121 GO:0046872
Gso11g0603 132 MobiDBLite consensus disorder prediction 63 107 - -
Gso11g0603 132 Gene3D - 1 73 - -
Gso11g0603 132 MobiDBLite consensus disorder prediction 75 102 - -
Gso11g0603 132 PANTHER OS04G0661100 PROTEIN 2 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0603 Gso-Chr11 5374520 5375502 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0603 - - gmx:100796373 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0603 11 5374520 5375502 Gso11g0603 11 5374520 5375502 ECH