Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0601 ATGAAGCATTTTGCCTTGGTGTTTCTTTTGGCCATTTTGGTCCCTCAGGAGTGTTTCCATGTCAGTGTGGAAGCAAGGGATGATTTCGTCAGAACCAGAGGCATCCACTTCATGCAGAATGGATACCCTTACTATGCAAATGGCTTCAATGCCTACTGGTTAATGTACACAGCTTCTGACCCATCTCAGAGATTCAAGGTTTCAAATGCCTTCAGAGAAGCAGCAAGCCACGGCCTTACTGTTGCTAGAACTTGGGCCTTCAGTGATGGTGGCTATAGACCACTACAATATTTCCCTGGCTTCTATAATGAACAAATGTTCACGGGGTTAGATTTTGTTGTATCTGAGGCCAGGAAGTACGGGATTAAGCTCATACTGAGCTTGGTGAACAACTATGAAAATTTTGGAGGCAAGAAGCAGTATGTGAACTGGGCTAGGAGTCACGGCCAGTACCTTACTTCAGATGATGATTTCTTTAGGAGCCCTGTTGTTAAGGGTTATTACATGAACCATGTGAGGACTGTTCTCAACAGATATAACAGATTTACTGGCATGCATTACAAAGATGACCCAACAATCATGGCCTGGGAGCTTATGAATGAACCTAGGTGCACATCGGATCCTTCAGGGAGAACTATTCAGGCGTGGATCACGGAAATGGCTTCGTTTGTTAAGTCCATAGACAGGAACCACTTATTGGAGGCTGGACTAGAAGGGTTTTACGGACAATCAACACCACAAAGAAAGAGATTGAATCCCGGTTTCGACATAGGAACAGACTTCATCGGAAACAATCGAATACCGGCCATTGATTTTGCAACAGTCCACTGCTACCCCGACCAATGGGTATCGAGCTCAAATATTCAGTATCAACTTTCATTCTTGAACAACTGGCTGAGTGCGCACTTCATAGACGCGCAATACCGTATAAAGAAACCAATACTAGTGGCGGAATTTGGGAAATCATTTAAGAGTTCGAGTTCGTACGAGAGGGATGAGGTGTTCAATTCAGTGTATTACAAAATATATGCTTCTGCTAAGAGAGGAGGGGCAGCGAGTGGAGCATTGTTCTGGCAGCTTCTGACGGAGGGTATGGAGTCTTTCCAAGATGGTTACGGAATAATTCTTGGGCAGAGTTCCTCTACGGCCAATCTCATTGCTCGCCAGTCCCGCAAGCTGTACCTGATTCGGAAGATCTTCGCGAGGGTCGCGAACATGCGGCGATGGCAAAGGGCCAGAGCTAGAGGTGGAAACGGAGGCAGATACATTGGCAACTGA 1278 0.4585 MKHFALVFLLAILVPQECFHVSVEARDDFVRTRGIHFMQNGYPYYANGFNAYWLMYTASDPSQRFKVSNAFREAASHGLTVARTWAFSDGGYRPLQYFPGFYNEQMFTGLDFVVSEARKYGIKLILSLVNNYENFGGKKQYVNWARSHGQYLTSDDDFFRSPVVKGYYMNHVRTVLNRYNRFTGMHYKDDPTIMAWELMNEPRCTSDPSGRTIQAWITEMASFVKSIDRNHLLEAGLEGFYGQSTPQRKRLNPGFDIGTDFIGNNRIPAIDFATVHCYPDQWVSSSNIQYQLSFLNNWLSAHFIDAQYRIKKPILVAEFGKSFKSSSSYERDEVFNSVYYKIYASAKRGGAASGALFWQLLTEGMESFQDGYGIILGQSSSTANLIARQSRKLYLIRKIFARVANMRRWQRARARGGNGGRYIGN* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0601 425 Gene3D Glycosidases 25 397 - -
Gso11g0601 425 PANTHER - 1 414 IPR045053 GO:0004553
Gso11g0601 425 Pfam Cellulase (glycosyl hydrolase family 5) 66 330 IPR001547 GO:0004553|GO:0071704
Gso11g0601 425 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 1 414 - -
Gso11g0601 425 SUPERFAMILY (Trans)glycosidases 29 385 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0601 Gso-Chr11 5362310 5365133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0601 1 421 Glycoside Hydrolase AT5G66460 66.588 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0601 K19355 - gmx:100784013 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0601 11 5362310 5365133 Gso11g0601 11 5362310 5365133 ECH
Gso1g1473 1 51447032 51449904 Gso11g0601 11 5362310 5365133 GST