Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0581 ATGGACTCCGACGCTATTGCCAAGGACTCAACAGAGCTAAAGTTGACCGAGCTATTGAAGGAGGTCACCGTAGACCACTCACATCAGTTCTCCAAGCTCGTCGACGACACCGTTTCCGCCATTAAAACCTCCATCGACAAAATCCCCAACGATTTCAAGGTAACTGCTGATTTAGCATCGCGCTTTGTTACGGACATTGGCGCAGATAAGGTCGAGTTCAAGTTTAAGAAGCCCGCGTTTGTTAAGATTGGTGGAAGTTGCTCCATACAGAGTCTCGCGAAGCCTGAAGTTAATGTCGATCTTATTATCAGGTTACCTAAGGAATGCTTCCATGAGAAGGATTATTTGAATTACAGATATCATGCCAAGAGGTGTCTCTATCTCTGCTTGGTGAAGAAGTATTTGGAGAAGTCTCCATCTATTGATAGGGTTGAATGGTCCACTCTGCAGAATGAGGCCAGAAAACCCCTGCTCGTTGTGTATCCAGCTGCTAAGCTTGTTGAAGTTCCTGGTTTTTTTGTAAGAATTATTCCATCAGCTAAGGCTATATTTAGCACTGCAAAGTTGAACCTGAAACGCAACAACATTCATAATTTGAGTAATGGGACTTCTCTTCAGGCTACACCAAAGTACAATTCTAGTATTTTGGAAGACATGTTTATAGAGGATGCAGAGTTTATCAACAACTATTATCTTGGATGGAAGGAACTAAAAGAGGCTTTAATCCTGCTTAAGGTTTGGGCTCGACAAAGAAGTTCAATATATGTTCACGATTGCCTGAATGGGTTTTTGATTTCTGTCATTTTGGCATATCTTGCTTCTAAGCAACATATTAGCAATTCAATGAAAGCAACTGAAATAATTCGCATCACGTTGAACTTTATTGCCACCTCAGAGCTGTGGAGCCGAGGTCTCTACTTTCCAAAGGAAGGCCAGAGCAATATTACAAAAGAGCAAAGGATGCAACTTAAAGAGTCATTTCCAGTTGTCATATGTCATCCATCTGGAGGATTCAATTTGGCCTTTCGAATGTCTAGGATTGGTTTTACTCGGCTTCAAAATGAGGCTACTTTGACACTTAGGTGCATGGAAAAGTGTAGAGATTGTGGATTTGAGGAAGTTTTTATGACCAAGATTGACTATGCTGTTAAATATGACTATTGTATGAGAATAAATTTGAAAGGAAAGAAGGAGGTATTTGCATCTGGATTTTGTTTGGACGATGAGTGCTGGAGATCATATGAGGATAAAATACATGGTATTTTATCTAAAGGGTTGAATGATAGAGCACAATTCATTCAAGTTACATGGAGAAATACACATTGCCAGTGGAGTGTGGATGATGGCTTGTCGGTACTTGATAAAGTGCCCTTGTTCGTAGGATTTTCAGTGAGTTCTTTGGAGAAAGCATTTAGGATGGTTGATATTGGCCCAAATGCTGAAAGTAAAGAAGAGGCTCTTGAATTTCGAAAGTTTTGGGGAGAAAAAGCAGATCTTAGAAGATTTAAAGATGGTAGAATTGCAGAAAGCACGGTGTGGGAAAGTGAACAATGGGCAAGGCATCTTGTTTTAAAAAGAATAATTGATCATGTACTTAGTCGGCATCTTTCTCTATCCAAGGAAAATATTGTAGTTGTTGTGGATCAACTTGATTTCTCTTTGCTTCACGGAGCTGGAGATCCTATATCATACTCTGGAAGTTTGCTTGGGGCATTTGATGTTTTATCAAAGCGTTTGCGTCTTATTGAAGACCTCCCTTTGAAGGTGTCTAGTGTACAGCCTTTAGACTCTGCTTTCAGGTTTACATCAGTCTTCCCTCCTGAACCTCATCTTCTAGCAAATGAAAAAAATGAATCTCTCAGACTGAATAAGTTAGTTCCGTCATGCATTCAACCACTGGAAGTTATGATTCAGCTGGAAGGTTCTGGGAACTGGCCAATGGATGAAATCGCAATTGAAAAAACAAAATGTAGTTTCCTTATCCAAATTGGAGTAAGTCTTCAAAAGATGTGGGGGATGACATGTACTGCCACTGAGGATAATGTGGACGTGTTAATGTCTGGATATTTATTTCGTCTAAAAATTTTGCATGAGAGGGGCCTTAGTTTGCTCAACAAGGAAATTGGGAGTGATCAAGCTAAGCGGATTCCTTCTGCTGACAAGAAACTTTTTATCCATAGTCAGCATGCTAACATGATCAATGGATTACAAAGTCGTTATCCAATATTTGGACCAGTAGTTAGACTTGCAAAACGATGGGCTGCTTCACATCTATTTTCAGCTTGCCTGTTAGAGGAGGCTGTTGAGCTATTGGTTGCATATCTTTTTCTTAATCCTTTGCCTTATGATGTTCCCTGCTCACGGATCACTGGGTTTTTGAGATTCCTGCGGTTACTCTCACACTATGATTGGACTTTCTCTCCGCTGGTTGTTGACATAAATCATGACTTGAGTCCAAGTGATGAGAAAGAAATAAATGACAACTTTTTGCTAAAAAGAAAAGGTCAGGGAGAAAATGGACAAAGTGTAGGACCAGCAATGTTCTTAGCTACAGTTTATGATAAAGAATCTGAGGCTTGGACTGGATTATCACCTAGTGGAATGGAACTTAAAAGGTTAGTTGCATATGCCCGAAGCAGTGCCAATTTGTTGGCAAAACTCACATTTCAGGAAGAGATTGGTCCATATAGGTGGGAGTGTCTTTTTAGAACTCCTTTAAACAATTATGATGCAGTAGTTATTCTCCACAAGGACAAACTACCGTATCCCCAAAGGCTTCTCTTCCCATCAGAAGTTAATCATGGAACACATGTTGCAGAAGGACACGCCAGCAAGTGTTTCCAACCCTTTTTGTTGCCTAAAGATTTGAAGGGCAGGCCAGAGGAACTTAAAAATAAGTTGCTGGTAGATTTTGATCCATCAAAGTGCTTTATCAGAGATTTAAAGCAAGAATTCTCAACCACATTCCAAGTATGGCATGATTATCTGGGAGGTGATGTTATCGGCCTAACATGGGGAGAGTCATATCCTTCCAAGCGGAAGCGCGAGGATGTAGTTGACCCCTGCAAGGTGTTAAAAGCGGTGGGGGAAGTTGGGAAAGGATTTGTGAGGAGTATATACTTTCTCAAGCCCCCAAAGCTCATGAATTAA 3150 0.4051 MDSDAIAKDSTELKLTELLKEVTVDHSHQFSKLVDDTVSAIKTSIDKIPNDFKVTADLASRFVTDIGADKVEFKFKKPAFVKIGGSCSIQSLAKPEVNVDLIIRLPKECFHEKDYLNYRYHAKRCLYLCLVKKYLEKSPSIDRVEWSTLQNEARKPLLVVYPAAKLVEVPGFFVRIIPSAKAIFSTAKLNLKRNNIHNLSNGTSLQATPKYNSSILEDMFIEDAEFINNYYLGWKELKEALILLKVWARQRSSIYVHDCLNGFLISVILAYLASKQHISNSMKATEIIRITLNFIATSELWSRGLYFPKEGQSNITKEQRMQLKESFPVVICHPSGGFNLAFRMSRIGFTRLQNEATLTLRCMEKCRDCGFEEVFMTKIDYAVKYDYCMRINLKGKKEVFASGFCLDDECWRSYEDKIHGILSKGLNDRAQFIQVTWRNTHCQWSVDDGLSVLDKVPLFVGFSVSSLEKAFRMVDIGPNAESKEEALEFRKFWGEKADLRRFKDGRIAESTVWESEQWARHLVLKRIIDHVLSRHLSLSKENIVVVVDQLDFSLLHGAGDPISYSGSLLGAFDVLSKRLRLIEDLPLKVSSVQPLDSAFRFTSVFPPEPHLLANEKNESLRLNKLVPSCIQPLEVMIQLEGSGNWPMDEIAIEKTKCSFLIQIGVSLQKMWGMTCTATEDNVDVLMSGYLFRLKILHERGLSLLNKEIGSDQAKRIPSADKKLFIHSQHANMINGLQSRYPIFGPVVRLAKRWAASHLFSACLLEEAVELLVAYLFLNPLPYDVPCSRITGFLRFLRLLSHYDWTFSPLVVDINHDLSPSDEKEINDNFLLKRKGQGENGQSVGPAMFLATVYDKESEAWTGLSPSGMELKRLVAYARSSANLLAKLTFQEEIGPYRWECLFRTPLNNYDAVVILHKDKLPYPQRLLFPSEVNHGTHVAEGHASKCFQPFLLPKDLKGRPEELKNKLLVDFDPSKCFIRDLKQEFSTTFQVWHDYLGGDVIGLTWGESYPSKRKREDVVDPCKVLKAVGEVGKGFVRSIYFLKPPKLMN* 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0581 1049 Pfam Nrap protein PAP/OAS1-like domain 5 740 892 IPR035370 -
Gso11g0581 1049 Pfam Nrap protein nucleotidyltransferase domain 4 565 737 IPR035369 -
Gso11g0581 1049 Pfam Nrap protein domain 1 99 223 IPR035082 -
Gso11g0581 1049 Pfam Nrap protein PAP/OAS-like domain 237 378 IPR035367 -
Gso11g0581 1049 Pfam Nrap protein domain 3 382 537 IPR035368 -
Gso11g0581 1049 Pfam Nrap protein domain 6 906 1039 IPR035371 -
Gso11g0581 1049 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 7 1041 IPR005554 -
Gso11g0581 1049 Gene3D - 198 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0581 Gso-Chr11 5187375 5195446 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0581 K14544 - gmx:100776157 2090.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0581 11 5187375 5195446 Gso11g0581 11 5187375 5195446 ECH