Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0580 ATGCAAAGTGCTCACAGTAACCACTCTAACGTTGGACATATTTATCAGCGATTTATCACTGTCGAATTAAATCGAAGATTCAGAAAAAGAAAAGCATTTTACGTTCGAAGTCGAGTCGAAGAGTTTTGGGAGCCAAATGGGTCTTCTGAGCATCATAAGGAAAATCAAGCGGAAAGAGAAGGAAATGCGAATTCTAATGGTTTGTTGTTCTGCAGCGGATTGGACAATTCTGGGAAAACCACAATCGTTCTAAAGATAAACGGAGAGGACACAAGCGTCATCAGTCCCACGCTCGGCTTCAACATCAAAACCATAACTTACCAAAAGTATACCCTAAATATATGGGATGTTGGGGGCCAGAAAACAATAAGATCTTACTGGAGAAACTACTTTGAGCAAACAGATGGTTTGGTTTGGGTGGTTGACAGTTCAGATCTCAGAAGGTTGGATGATTGCAAATTCGAGCTCGATAACCTTCTCAAGGAAGAGAGGCTATCCGGAGCATCTTTACTGATACTTGCAAATAAACAGGACATAAAAGGTGCCCTTACTCCTGAAGAAATAGCTAAGGTGCTGAACTTGGAAGCCATGGATAAATCTCGGCATTGGCAGATAGTTGGCTGTAGTGCATACACTGGTGAGGGTCTGCTTGAGGGATTTGATTGGTTGGTTCAGGACATAGCCTCTAGAATCTACATGCTTGACTGA 708 0.4223 MQSAHSNHSNVGHIYQRFITVELNRRFRKRKAFYVRSRVEEFWEPNGSSEHHKENQAEREGNANSNGLLFCSGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTITYQKYTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKFELDNLLKEERLSGASLLILANKQDIKGALTPEEIAKVLNLEAMDKSRHWQIVGCSAYTGEGLLEGFDWLVQDIASRIYMLD* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0580 235 TIGRFAM small_GTP: small GTP-binding protein domain 73 200 IPR005225 GO:0005525
Gso11g0580 235 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2 69 235 - -
Gso11g0580 235 Gene3D - 50 232 IPR027417 -
Gso11g0580 235 PANTHER ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-RELATED 69 235 IPR044612 GO:0003924
Gso11g0580 235 Pfam ADP-ribosylation factor family 70 227 IPR006689 GO:0003924|GO:0005525
Gso11g0580 235 PRINTS GTP-binding SAR1 protein signature 68 91 IPR006689 GO:0003924|GO:0005525
Gso11g0580 235 PRINTS GTP-binding SAR1 protein signature 96 120 IPR006689 GO:0003924|GO:0005525
Gso11g0580 235 PRINTS GTP-binding SAR1 protein signature 123 148 IPR006689 GO:0003924|GO:0005525
Gso11g0580 235 PRINTS GTP-binding SAR1 protein signature 201 225 IPR006689 GO:0003924|GO:0005525
Gso11g0580 235 CDD Arl2 73 226 IPR045873 GO:0003924
Gso11g0580 235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 229 IPR027417 -
Gso11g0580 235 SMART arf_sub_2 48 231 - -
Gso11g0580 235 SMART sar_sub_1 50 227 IPR006689 GO:0003924|GO:0005525
Gso11g0580 235 ProSiteProfiles small GTPase Arf family profile. 60 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0580 Gso-Chr11 5183527 5186049 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0580 K07943 - gmx:100305563 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0580 11 5183527 5186049 Gso11g0580 11 5183527 5186049 ECH