Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0567 ATGAAGTGCCCGTATTGTTCGGCGGCGCAGGGGCGTTGCGCCACCACGAGCGGCGGGCGTTCGATCACGGAATGCACGTCTTGCGGGCGCGTGGTGGAAGAGCGACAGTCGCATCCCCACCACGTGTTCCACGTGCGCGCCCAGGACAACCCTCTGTGTCTCGTCACATCGGATCTCGCTCTCCCCGCGCTCAATCAAAACAACGACGAGGAGGACCCTTTCGAGCCCACGGGCTTCATCACCGCCTTCTCCACCTGGGCCCTCGAGCCCAACCCACTTTACCTCCAGTCCTCCCTCTCCTTCTCCGGCTACCTCGCCGAGCTCGAACGCACTCTCGAATCATCATCATCATCATCCTCTTCCTTCACTTCTTCTTCTTCTTCTTCGTCGACGGTGGTGGTTGATAATTTGAGGGCGTACATGCAGATTATCGATGTGGCGTCAATTCTAGGGTTGGACTGCGATATCTCCGACCACGCTTTTCAGTTATTCAGGGATTGTTGCTCCGCTACGTGTTTGAGAAACCGCAGTGTGGAGGCGCTTGCTACTGCAGCTCTCGTTCAGGCCATTAGAGAGGCTCAAGAGCCCAGAACCCTTCAGGAAATTTCAATTGCTGCCAATGTACCGCAAAAGGAAATTGGGAAATACATTAAGATACTGGGAGAGGCTTTGCAGCTAAGTCAACCTATTAACAGCAATTCCATTTCAGTTCATATGCCAAGATTTTGCACGCTTCTTCAGCTCAATAAATCTGCTCAGGAACTGGCTACTCACATAGGAGAGGTTGTGATCAACAAATGCTTCTGCACCCGCAGGAATCCGATTAGCATCTCAGCTGCTGCTATATATTTGGCTTGCCAACTTGAAGACAAACGCAAAACCCAGGCAGAAATTTGTAAGGTAACTGGTCTTACTGAGGTCACTCTCCGTAAAGTGTACAAGGAACTATTGGAGAATTGGGATGATTTACTTCCCTCTAATTACACCCCAGCTGTTCCTCCAGAGAGGGCATTTCCCACAACGGTAATTGCTTCTGGTCGTTCTTCAACGGCTAAGGTTGATGCTGTAGAGGTTATTTCTTCTTTGGACCCAGAAAAGTTGCCAGATATTAAACATAGCAAACCTAATGAGGGCCCGGGCATGGTTCATCATCCCAGAGGGAAGGATGAGGCTGTTGGTGGTTATCATGCAAGCCATTCCACACTGAATCAACAGTCAACTTTTTGGCAATCCCAGCTTCCCAGTGGGACACACAATCATCAGAATGTTTTGCAAGGAATGGATATTGATGTATCGCAGCGAAACCACCAACAGCCAGAACACATGGCAGAGGATACAACAAATGGTGCTGCCAATGGTAGTTCTCTAAAATCAAACCAACTTTGTAGTCCTCCTGCTTCTAGTGCAAGTTCTGTTATGAGGCAGTTTTCAGCTCCCCCTTCATCTGGGCCTTCAAATGTTCGATAA 1467 0.4963 MKCPYCSAAQGRCATTSGGRSITECTSCGRVVEERQSHPHHVFHVRAQDNPLCLVTSDLALPALNQNNDEEDPFEPTGFITAFSTWALEPNPLYLQSSLSFSGYLAELERTLESSSSSSSSFTSSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSSTAKVDAVEVISSLDPEKLPDIKHSKPNEGPGMVHHPRGKDEAVGGYHASHSTLNQQSTFWQSQLPSGTHNHQNVLQGMDIDVSQRNHQQPEHMAEDTTNGAANGSSLKSNQLCSPPASSASSVMRQFSAPPSSGPSNVR* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0567 488 MobiDBLite consensus disorder prediction 366 397 - -
Gso11g0567 488 SUPERFAMILY Cyclin-like 138 228 IPR036915 -
Gso11g0567 488 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 485 IPR000812 GO:0006352|GO:0070897
Gso11g0567 488 CDD CYCLIN 139 220 IPR013763 -
Gso11g0567 488 MobiDBLite consensus disorder prediction 442 488 - -
Gso11g0567 488 SUPERFAMILY Cyclin-like 235 333 IPR036915 -
Gso11g0567 488 SMART cyclin_7 141 222 IPR013763 -
Gso11g0567 488 SMART cyclin_7 237 318 IPR013763 -
Gso11g0567 488 Gene3D - 137 228 - -
Gso11g0567 488 MobiDBLite consensus disorder prediction 366 393 - -
Gso11g0567 488 Pfam Transcription factor TFIIB repeat 237 318 IPR013150 GO:0017025
Gso11g0567 488 Pfam Transcription factor TFIIB repeat 139 220 IPR013150 GO:0017025
Gso11g0567 488 MobiDBLite consensus disorder prediction 434 488 - -
Gso11g0567 488 CDD CYCLIN 239 317 IPR013763 -
Gso11g0567 488 Gene3D - 237 333 - -
Gso11g0567 488 PANTHER PLANT-SPECIFIC TFIIB-RELATED PROTEIN 1 1 485 - -
Gso11g0567 488 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Gso11g0567 488 PRINTS Transcription initiation factor IIB signature 183 202 IPR000812 GO:0006352|GO:0070897
Gso11g0567 488 PRINTS Transcription initiation factor IIB signature 209 224 IPR000812 GO:0006352|GO:0070897
Gso11g0567 488 PRINTS Transcription initiation factor IIB signature 238 256 IPR000812 GO:0006352|GO:0070897
Gso11g0567 488 PRINTS Transcription initiation factor IIB signature 272 288 IPR000812 GO:0006352|GO:0070897
Gso11g0567 488 PRINTS Transcription initiation factor IIB signature 304 318 IPR000812 GO:0006352|GO:0070897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0567 Gso-Chr11 5058336 5060681 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0567 K03124 - gmx:100815371 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0567 11 5058336 5060681 Gso11g0567 11 5058336 5060681 ECH