Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0564 ATGGAGATCGAGCGGGGTAACAATAATGAGCACAAAGGTTCAAGATATGCCGTTGCATGTGCGGTAGTCACTTCCATGATATCCATTATATTTGGTTATGATACTGGTGTTATGAGTGGGGCCCTGATATTCATAAAGGAGGAGCTAGGAATCAGCGACACCCAACAAGAAGTTCTAGCTGGCATCTTAAACATTTGTGCATTGTTTGGTTCTTTAGTTGCAGGAAGAACCGCTGATTACATTGGTCGACGCTACACAATCACCCTAGCCTCTATTCTTTTCATGGTTGGTTCAGTTCTCATGGGATATGGTCCAAACTACGCAATTTTAATGACTGGAAGGTGTGTTGCGGGTATTGGTGTCGGTTTTGCTCTTTTGATAGCACCAGTTTATGCCGCAGAAATCTCCTCTACTAAATCCCGAGGCTTTGTAACCTCCCTACCCGAGCTTTGTATTGGCATTGGAATTTTACTTGGTTACATAGTAAACTACTTGTTTGGGAAACTAATTTTGAGGCTTGGATGGAGATTGATGCTTGGTATTGCAGCAGTTCCTTCACTTGCTTTGGCTTTGGGCATTCTGGCAATGCCAGAGTCTCCAAGGTGGTTGGTGATGCAAGGCCATTTGGGAAAAGCCAAGAAAGTTCTATTACAAGTTTCAGACACAGAAGAAGAAGCTGAGCTTCGGTTGAAGGATATAAAGAGTGCTGCCGGCATTGACGAGAATTGCACTGAGGAAATAGTTAAACTTCCTCAAAAGGACAATGGTGAAGCGGTTTGGAAAGAGTTGATTTTCAGGCCCTCTTATTCTGTTCGGTGGATGCTGATTGCTGCTGTGGGGATTCACTTTTTTGAGCATGCAACTGGAATTGAAGCTGTTATGTTATACAGTCATAGAATCTTTAAGAAAGCAGGTGTTACCAGCAAGGACAAGCTCTTGCTCACAACCATTGGAGTAGGCCTTACAAAAGTCATTTGCTTGATAATAGCCACTTTTTTTATTGACAAAGTTGGGAGAAGACCCCTCTTGCTTGTAAGCGTTGGAGGAATGGTTTGTAGCCTTGGGGTGTTAGGATTCAGCTTGACCATGGTGGATACATCCCACGAGGAACTCTTGTGGGCATTAATTCTTAGCATTGTGGCCACTTATATCTATGTTGCGTTTTTCAATCTTGGGCTTGGACCTATCACGTGGGTCTATAGCTCTGAGATTTTCCCTTTGAAGTTGAGGGCACAAGGAGCAAGTATAGGAGTTGCAGTCAACAGACTCACCAATGCTGCTATTTCCATGAGTTTTATATCAATCTATAATGCAATTACCATAGGCGGGGCTTTTTTCATGTTTGCTGGTATATCTGTTATTGCTTGGGCGTTCTTCTACTTTTTCATGCCAGAAACCAAAGGCGTGGCCTTGGAAGAGATGGAGATGCTTTTCAGCAAAAACAAGGGAAATAATGTAACTACTACAGAAATCGACCTGAGGCAGATTCTCTAG 1494 0.4297 MEIERGNNNEHKGSRYAVACAVVTSMISIIFGYDTGVMSGALIFIKEELGISDTQQEVLAGILNICALFGSLVAGRTADYIGRRYTITLASILFMVGSVLMGYGPNYAILMTGRCVAGIGVGFALLIAPVYAAEISSTKSRGFVTSLPELCIGIGILLGYIVNYLFGKLILRLGWRLMLGIAAVPSLALALGILAMPESPRWLVMQGHLGKAKKVLLQVSDTEEEAELRLKDIKSAAGIDENCTEEIVKLPQKDNGEAVWKELIFRPSYSVRWMLIAAVGIHFFEHATGIEAVMLYSHRIFKKAGVTSKDKLLLTTIGVGLTKVICLIIATFFIDKVGRRPLLLVSVGGMVCSLGVLGFSLTMVDTSHEELLWALILSIVATYIYVAFFNLGLGPITWVYSSEIFPLKLRAQGASIGVAVNRLTNAAISMSFISIYNAITIGGAFFMFAGISVIAWAFFYFFMPETKGVALEEMEMLFSKNKGNNVTTTEIDLRQIL* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0564 497 Gene3D MFS general substrate transporter like domains 9 482 IPR036259 -
Gso11g0564 497 Pfam Sugar (and other) transporter 20 478 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso11g0564 497 ProSitePatterns Sugar transport proteins signature 1. 74 91 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso11g0564 497 ProSitePatterns Sugar transport proteins signature 2. 116 141 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso11g0564 497 TIGRFAM SP: MFS transporter, sugar porter (SP) family 14 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g0564 497 PANTHER POLYOL TRANSPORTER 3-RELATED 9 488 - -
Gso11g0564 497 SUPERFAMILY MFS general substrate transporter 10 475 IPR036259 -
Gso11g0564 497 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 9 488 IPR045262 GO:0015144
Gso11g0564 497 PRINTS Sugar transporter signature 28 38 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g0564 497 PRINTS Sugar transporter signature 111 130 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g0564 497 PRINTS Sugar transporter signature 285 295 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g0564 497 PRINTS Sugar transporter signature 379 400 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g0564 497 PRINTS Sugar transporter signature 402 414 IPR003663 GO:0016020|GO:0022857|GO:0055085
Gso11g0564 497 ProSiteProfiles Major facilitator superfamily (MFS) profile. 20 467 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0564 Gso-Chr11 5042144 5044786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0564 14 485 Organic Solute Cotransporters AT4G36670 65.409 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0564 - - gmx:102661358 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0564 11 5042144 5044786 Gso11g0564 11 5042144 5044786 ECH