Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0557 ATGGAGCCTCGCAAAGCTTCACCATTATCGTGGGTCTTGATCTTCTTCCTTACCATTTCCTTGTGGGGAGTTAAGGTATCAAGTGAAGAGCACCACCACCATGGCAAATCTAAAGAGGGACCTGTGGTGGAAAGGGATCAAAGGAGGACATTACTTGTCACTGAATTTGGAGAGATCACTGCCATTGACATCAAGGAAGGACAAAAGGAACTACCCTACCATCTTCAGTTCATCACATTGGAGCCAAACTCGCTATTTCTCCCTGTGCTTCTCCAAGCAGACATGGTCTTTTATGTTCATACAGGGAGTGGAAAGCTGACTTGGGCAAATGATGATGGTACTAGTACGATTCGTTTACGCGAAGGAGATGTCTGCAGTCTCAATGAAGGATCTGTTTTCTATATACAGAGCAACTTAGAGGCTGAGAGAAGGAAACTTAGGATTTATGCAATGTTTACCAACACAGACGACAATACTTACGATCCATCAATCGGTGCTTACTCAAGGATCAATGAACTGGTCAAAGGCTTTGATAAGAAAATCATGCAAGCAGCTTTGAAGGTGCCGGAAGATTTGATCGAAGCAATCATTAACAAGACGGAGACTCCAGCTATAGTGCATGCGGTTCCAGAGAAGCGAAATATTGTCCAGGAGCTGGAGGCTTCGTTTCTTAAAAACTTTTTAGGCGTTGGGTCCAACTCCAAGAAACTCGAAACATACAACATCTTTGAGCATGACCCTGACTTCAAAAATCCCATTGGTTGGAGCACAGCAGTGACCAAAAAGCAACTAAAGTCATTGAAGCGGACCAACATTGGATTTCTGATGGTGAATTTGAACATGGGATCAATATTGGGGCCTCATTGGAATGCAAAGGCAACAGAGTTGACAGTGGGAGTGGATGGGGAAGGCATGGTCCGAGTAGTATGTGGAAGCGGCAATGAAAATGAGACAGAATGCCAAAACATGAGGTTTAAGGTTAAGGAAGGTGATGCTTTTCTGGTGCCTAGGTTTCATCCAATGGCTCAGATGTCATTCAACAATGGACCATTTGTTTTTCTCGGCTTCAGCACTTCAGCAAAGAAAAACCACCCTCAGTTTTTGGCGGGAAAGGGATCAGTGCTTCATATTCTAGACAAAAAGATACTGGCCAGGTCTTTGGGTGTGAGTAACAGAACCATTGATGAGCTTCTGCGTTCTCCCGAGGACTCCATCATTTTCAGATGCAGTTCCTGCGCAGAGGAAGAGGAGAAGATAATGAAGGAGGAGGAGGAGGAAGAGGAGAGCAAGAAAGAAGAAGAAGAGAGGAAGAAAAAAGAAGAGGAGGAGGAGGAAGAGGAGAAAAAGAAAAAAGAGGAGAGGAAGAGAGAGGAAGAGGAAGCTAAAAGGCAACAAGAAGAGAGGGAAAAGAAGCGAGGGGAGGAGGAAGCTAAGAGAGAAAGAGAGGAAGAAAAAGCTAGGATGGAGAAAGAAAGGGAAAGGAAAGGAGAAGAGGAAGCAGAAAGGGAGGAAGAAGAAGCTAGAAGAGAGCAAGAATGGAGAAGAAAAAAGGAAGAAGCAGCTGCTAAAAGAGAGCAAGAAAAGAGGGAAAGGAGGAGACAGGAAGAAGAAGCTAAAAAATGGGCAGAAGAGAAGGCTGAAAGGGAGCAAGAACAAGCTACGAGAGAAGCAGAAGAAGCACAGAGGGAACAAGAACAAGCTAAAAGAGAAGCAGCACAGAGGGAACAAGAACGGGCAAAAAGAGAGCAAGAAAGGAGGCGGCGAGAAGAAGTAGCTGGAAAGGGAGAAGAGGAGGAAGAACACGCAGGAAGAGGGCACGAAAGGAGAAAAGAAGAAGAAGAAACAGCACGGAGGGAACAAGAACAAGAACAGGCTGAAAGACAGCAACAAAAGAGAGAAAAGAGGAGACAAAAGGAGGAACAAGGAGAAGGAGAAGAAGAAGAAGAAGAAGATGAAGAAGAACCAACATGGTGGGAGAGAAGAGAAAGAAGAAAACAGAAGGGGAAAAGTCCAGAAGAAGGAGTAGAATGGGAGCAAGAAGAAGCCAGGACAGCAAGCAGGGAGGGAGAGAAGAAAACACCGAGAGAGTGA 2091 0.45 MEPRKASPLSWVLIFFLTISLWGVKVSSEEHHHHGKSKEGPVVERDQRRTLLVTEFGEITAIDIKEGQKELPYHLQFITLEPNSLFLPVLLQADMVFYVHTGSGKLTWANDDGTSTIRLREGDVCSLNEGSVFYIQSNLEAERRKLRIYAMFTNTDDNTYDPSIGAYSRINELVKGFDKKIMQAALKVPEDLIEAIINKTETPAIVHAVPEKRNIVQELEASFLKNFLGVGSNSKKLETYNIFEHDPDFKNPIGWSTAVTKKQLKSLKRTNIGFLMVNLNMGSILGPHWNAKATELTVGVDGEGMVRVVCGSGNENETECQNMRFKVKEGDAFLVPRFHPMAQMSFNNGPFVFLGFSTSAKKNHPQFLAGKGSVLHILDKKILARSLGVSNRTIDELLRSPEDSIIFRCSSCAEEEEKIMKEEEEEEESKKEEEERKKKEEEEEEEEKKKKEERKREEEEAKRQQEEREKKRGEEEAKREREEEKARMEKERERKGEEEAEREEEEARREQEWRRKKEEAAAKREQEKRERRRQEEEAKKWAEEKAEREQEQATREAEEAQREQEQAKREAAQREQERAKREQERRRREEVAGKGEEEEEHAGRGHERRKEEEETARREQEQEQAERQQQKREKRRQKEEQGEGEEEEEEDEEEPTWWERRERRKQKGKSPEEGVEWEQEEARTASREGEKKTPRE* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0557 696 CDD cupin_7S_vicilin-like_N 51 212 - -
Gso11g0557 696 PANTHER OS03G0336100 PROTEIN-RELATED 9 458 - -
Gso11g0557 696 Pfam Cupin 240 393 IPR006045 -
Gso11g0557 696 MobiDBLite consensus disorder prediction 431 642 - -
Gso11g0557 696 Gene3D Jelly Rolls 33 225 IPR014710 -
Gso11g0557 696 Gene3D Jelly Rolls 232 410 IPR014710 -
Gso11g0557 696 SUPERFAMILY RmlC-like cupins 55 400 IPR011051 -
Gso11g0557 696 SMART Cupin_1_3 240 395 IPR006045 -
Gso11g0557 696 Coils Coil 412 594 - -
Gso11g0557 696 CDD cupin_7S_vicilin-like_C 247 404 - -
Gso11g0557 696 PANTHER PREPROMP73 9 458 - -
Gso11g0557 696 MobiDBLite consensus disorder prediction 656 696 - -
Gso11g0557 696 MobiDBLite consensus disorder prediction 418 696 - -
Gso11g0557 696 Coils Coil 603 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0557 Gso-Chr11 4997622 5000577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g0557 8 420 Miscellaneous Gene Families AT2G18540 45.045 2.04e-115 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0557 - - gmx:100813415 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0557 11 4997622 5000577 Gso11g0557 11 4997622 5000577 ECH