Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0550 ATGGGGAAAGGAGGCGGCTGCGTTCCCAGCAAGAAGAAGCCCCCGCCGGTCGCCGACGATGCTCCCGCTCCCACGCCGCCGCCGATCTCGCCTCCGGATAACGCCCACGCCCGCAAACCCGACGCTCCAGCGCAAGTAGCGCGTGAAGCAGCGTCGTCGTCGTCGTCGCTTCCGGGCGGTGCGAGATTGAAGGTCTTCGTCGTGTTCTATTCGATGTACGGACACGTGGAGGGGCTGGCAAAAAGGTTGAAGAAAGGCGTGGACGGTGTGGAGGGTGTGGAAGGGGTTCTGTATAGGGTTCCGGAGACATTGCCGATTGAGGTGCTGAATCAGATGAGGGCGCCGCCCAAGGACGACGCCATACCGGAGATTACGGCGGCGGAGTTAACTGCCGCCGATGGGGTCTTGTTCGGGTTTCCGACGAGGTACGGGTCGATGGCGGCGCAAATGAAGGCTTTCTTTGACTCCACGGGGCATTTGTGGAAGGAGCAGAAGCTTGCGGGGAAACCCGCTGGGTTCTTTGTTAGCACTGGAACTCAAGGAGGAGGCCAAGAAACTACTGCTTGGACGGCAATCACTCAGCTGGTGCATCATGGAATGCTTTTTGTTCCTGTTGGATATACATTTGGACCCGGAATGTTCAAGATGGATGACATTAGAGGTGGTACTCCATATGGTGCAGGAGTGTTTGCCGGTGACGGCACAAGAGAGCCAAGTGAAACAGAGATGGCTCTTGCAGAGCATCAGGGCAAGTATATGGCTATTGTAGTTAAGAAGCTCGCCCAGTCATGA 792 0.5707 MGKGGGCVPSKKKPPPVADDAPAPTPPPISPPDNAHARKPDAPAQVAREAASSSSSLPGGARLKVFVVFYSMYGHVEGLAKRLKKGVDGVEGVEGVLYRVPETLPIEVLNQMRAPPKDDAIPEITAAELTAADGVLFGFPTRYGSMAAQMKAFFDSTGHLWKEQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLFVPVGYTFGPGMFKMDDIRGGTPYGAGVFAGDGTREPSETEMALAEHQGKYMAIVVKKLAQS* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0550 263 ProSiteProfiles Flavodoxin-like domain profile. 65 253 IPR008254 GO:0010181
Gso11g0550 263 Gene3D - 62 261 IPR029039 -
Gso11g0550 263 MobiDBLite consensus disorder prediction 1 57 - -
Gso11g0550 263 MobiDBLite consensus disorder prediction 15 34 - -
Gso11g0550 263 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 64 260 IPR010089 GO:0003955|GO:0010181
Gso11g0550 263 Pfam NADPH-dependent FMN reductase 79 205 IPR005025 GO:0016491
Gso11g0550 263 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 8 262 - -
Gso11g0550 263 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1-LIKE 2-RELATED 8 262 - -
Gso11g0550 263 SUPERFAMILY Flavoproteins 64 260 IPR029039 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0550 Gso-Chr11 4934130 4936698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0550 K03809 - gmx:100807532 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0550 11 4934130 4936698 Gso11g0550 11 4934130 4936698 ECH
Gso1g1525 1 51935993 51938606 Gso11g0550 11 4934130 4936698 GST