Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0549 ATGGAAGATACACTTTCTGCGTTGAGGTCTTTGATGCTTTCTCAGTCTCCACCGCTTGATGCCTTAGTTGTTCCTTCTGAAGATTATCACCAGAGCGAATATGTGTCCGCACGAGACAAGCGCCGCGAATTCGTTTCCGGCTTCACTGGAAGTGCCGGCTTGGCACTTATAACAAAGAATGAAGCACTGCTGTGGACGGATGGACGATATTTTTTGCAGGCTGAGCAAGAACTTAGTGCTCAGTGGAAGCTTATGCGTATTGGTGAAGATCCTGCTGTAGATATCTGGATGGCCGATAATTTGCCAAAAGAGGCATCCATTGGGGTTGACCCTTGGTGCATTTCAATTGATACTGCTCAAAGATGGGAGCGTGCTTTTGCCGAAAAACAGCAAAAGCTGGTTCCAACCTCAAAAAATTTGGTGGATGAAGTTTGGATAAATCGCCCACAGCCACAGATTAATGCTGTTATCGTACATCCACTGAAATTTGCAGGTCGCTCTGTCGCAGACAAGTTGAAAGATTTGAGAAAAAAGCTTGTACATGAGCAAGCCCGCGGGATAATTTTCACAGCACTTGATGAAGTTGCATGGTTGTATAATATTCGTGGAAGTGATGTGGCCTACTGTCCTGTTGTTCATGCATTTGCTATTGTGACATCCAATTCTGCTTTCATTTATGTGGACAAACGAAAGGTTTCTGTTGAGGTACAAGCTCATTTAGTGGAGAATGGAATTGAAATTCGAGAGTATACAGCTGTAAGCTCTGATACGACATTGCTTGCAACTGATGAGCTTGATTCTGTATCTACCGCCAAGGTTGCTTTAGCTGAAACAGAGGTCAGAAAAATTCCCAATGAAACTGCTAAGCATGCAAATGGTGAACATCAAGCAGAAGAAAATAGTAATGACCTCATATGGGCTGATCCAGGTTCATGCTGTTATGCACTGTATGCAAAGTTGAACCCTGATACAGTTCTCTTGCATCAATCACCTTTGGCCCTTGCGAAAGCTTTAAAGAACTCGGTGGAATTGGACGGGTTAAAGAAGGCACATATTCGGGATGGTGCAGCGGTCGTGCAGTATCTTGTCTGGCTGGATAAGAAGATGCAGGATATTTTGGGAGCTTCTGGTTACTTTTTGGAGAACGATTCTGTGAAAAAGGAGAAACATTTGCAGTCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTTTCGAGCATCAAAAGAGCATTTCAGAGGATTGAGTTTCCCCACTATTTCTTCAGTTGGCCCAAATGCAGCTATAATTCATTATTCTCCAAAGGCAGAAACATGTGCTGAACTTGATCCAGACAAAATTTATCTTTTTGATTCTGGAGCCCAGTATCTAGATGGAACAACAGATATTACACGAACAGTTCATTTTGGTAAACCTTCGACTCACGAAAAAGCGTGTTATACAGCAGTCCTAAAGGGTCACATTGCTCTTGGAAATGCTAGATTTCCCAATGGGACAAATGGGCATTCTCTTGATATTCTTGCTCGAATTCCTTTGTGGAAGGATGGTCTTGATTATCGACATGGTACTGGTCATGGAATTGGGTCCTATTTGAATGTTCATGAAGGACCTCACTTAATCAGTTTCAGACCACAGGCTCGAAATGTACCATTGCAATCTTCCATGACTGTTACAGATGAACCTGGTTACTATGAGGATGGAGAGTTTGGGATAAGATTGGAGAATGTGCTTATTGTCAAAGAGGCTGGTACAAATTTCAATTTTGGTGATAGAGGTTACTTATCTTTTGAACACATTACCTGGGCACCATATCAGACCAAGTTGATTGACCTGAACCTTCTATGTCCTGAGGAGATAGATTGGCTGAACTCGTATCACTCCACATGCAGAGATATTCTAGCGCCATATTTGAATGAAGTTGAAAATGCATGGCTGAAAAAAGCCACTGAACCCGTAGGTGCATGA 1974 0.4255 MEDTLSALRSLMLSQSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITKNEALLWTDGRYFLQAEQELSAQWKLMRIGEDPAVDIWMADNLPKEASIGVDPWCISIDTAQRWERAFAEKQQKLVPTSKNLVDEVWINRPQPQINAVIVHPLKFAGRSVADKLKDLRKKLVHEQARGIIFTALDEVAWLYNIRGSDVAYCPVVHAFAIVTSNSAFIYVDKRKVSVEVQAHLVENGIEIREYTAVSSDTTLLATDELDSVSTAKVALAETEVRKIPNETAKHANGEHQAEENSNDLIWADPGSCCYALYAKLNPDTVLLHQSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKKMQDILGASGYFLENDSVKKEKHLQSLKLTEVTVSDQLEGFRASKEHFRGLSFPTISSVGPNAAIIHYSPKAETCAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEKACYTAVLKGHIALGNARFPNGTNGHSLDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPQARNVPLQSSMTVTDEPGYYEDGEFGIRLENVLIVKEAGTNFNFGDRGYLSFEHITWAPYQTKLIDLNLLCPEEIDWLNSYHSTCRDILAPYLNEVENAWLKKATEPVGA* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0549 657 Gene3D Creatinase/methionine aminopeptidase superfamily 337 655 IPR036005 -
Gso11g0549 657 Pfam C-terminal region of peptidase_M24 596 654 IPR032416 -
Gso11g0549 657 Gene3D - 146 335 IPR029149 -
Gso11g0549 657 SUPERFAMILY Creatinase/aminopeptidase 340 621 IPR036005 -
Gso11g0549 657 Pfam Creatinase/Prolidase N-terminal domain 147 343 - -
Gso11g0549 657 Pfam Creatinase/Prolidase N-terminal domain 6 142 IPR000587 GO:0016787
Gso11g0549 657 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 132 IPR029149 -
Gso11g0549 657 Gene3D - 1 145 IPR029149 -
Gso11g0549 657 CDD APP 346 592 IPR033740 GO:0070006
Gso11g0549 657 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 524 536 IPR001131 -
Gso11g0549 657 PANTHER AMINOPEPTIDASE P1 2 655 - -
Gso11g0549 657 Pfam Metallopeptidase family M24 348 584 IPR000994 -
Gso11g0549 657 PANTHER XAA-PRO AMINOPEPTIDASE 1 2 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0549 Gso-Chr11 4915536 4922459 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0549 K01262 - gmx:100803268 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0549 11 4915536 4922459 Gso11g0549 11 4915536 4922459 ECH