Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0544 ATGATGGGGGGTCAATCCAGTAAGATACCTAGCAGTAGTGATGTTCCAACACCCATCAAAATGGGTACCCATTCTCTGTATGCGGCTGATTTGAGTTCTTATGAGGCGGCATGTGTTGAAGATCCAAACTTGCAATCCTTAGATGCTACAATTCAGGAGCGCACCAACAGGGTGATCACCTCGCTTGCCCAAGGGATTGAGGTTCATTCCATATCGATTGAGTCACTAGGGGAAGTGACTGGTAGTTTGCTTGAAATGAATCAGGATGTTGCCAAAGTCATTCTAGAGTGTAAGCAAGATATATGGAACAAGAAGGACAGGGAGCTCTTCTCCTTGGTGGAGGACTTCTTTGAAAATAGCCTCCAGACATTGGAATTCTGCAATGCTCTTGATAAATGCTTGAATCGAGCACGCGAAAGGCATGTTATAGTTAAGTCTGCAATTACCTGTTTTGAGGAAGAGGTGCAAAATGGGGTTGAAGGGTCCACTTATTTGAAGACATTGCAAGAGCTTAAGGGTTTCAAGGAAGCCGGGGACCCCTTCACCGAAGAGTTTTATTCCTTGTTTCAGTCAGTTTATCAACAGCAGGCATCAATGCTGAAGAAATTGCAAATCAGAAAGCAAAAGCTTGATAAGAAACTGAAGTCCCTGAAGACATTGAAGAGGGTGTCAAATGCCATTTTCGTGGCTGCTTTTGTGTCTGTTTTGATTTTCTCGGTGGTGGCAGCTGCAATTGCTGCACCACCTGTTGTAACTGCTTTGGCTGGTGCATTGGCTGTTCCTATAGGCTCAGTGGGGAAATGGTGTAACTCTCTTTTTAAGCGATATGAGACAGCTTTAAAGGGCCAAAGAGAATTAATCATTTCGATGCAGGTTGGCACTTACATTACATTGGTGGACTTGAAGCACATTCAGGTGCGCATTGACCAATTGGAAATAAACATAGAGTCCATGTTGCAGAGTTCTGATTTTGCTCTTAGAAATGAGGATGCTGTAAAGTTTGCGATTGATGAGATTAAGAAGAATATAGACACTTTTGCAGAGACCATTGAGGCTTTGAGTAAGCAAGCTGATGAATGTAGTCGGCAGATAAGGAGAGCAAGGACAATGGTTGTGAAAAAGATTATTAATTACACAAACACTAGCTGA 1149 0.4282 MMGGQSSKIPSSSDVPTPIKMGTHSLYAADLSSYEAACVEDPNLQSLDATIQERTNRVITSLAQGIEVHSISIESLGEVTGSLLEMNQDVAKVILECKQDIWNKKDRELFSLVEDFFENSLQTLEFCNALDKCLNRARERHVIVKSAITCFEEEVQNGVEGSTYLKTLQELKGFKEAGDPFTEEFYSLFQSVYQQQASMLKKLQIRKQKLDKKLKSLKTLKRVSNAIFVAAFVSVLIFSVVAAAIAAPPVVTALAGALAVPIGSVGKWCNSLFKRYETALKGQRELIISMQVGTYITLVDLKHIQVRIDQLEINIESMLQSSDFALRNEDAVKFAIDEIKKNIDTFAETIEALSKQADECSRQIRRARTMVVKKIINYTNTS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0544 382 PANTHER UPF0496 PROTEIN 3-RELATED 2 378 IPR007749 -
Gso11g0544 382 Coils Coil 336 370 - -
Gso11g0544 382 Pfam Protein of unknown function (DUF677) 44 375 IPR007749 -
Gso11g0544 382 PANTHER UPF0496 PLANT-LIKE PROTEIN 2 378 - -
Gso11g0544 382 Coils Coil 301 321 - -
Gso11g0544 382 Coils Coil 193 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0544 Gso-Chr11 4858034 4860504 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0544 - - gmx:100819451 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0544 11 4858034 4860504 Gso11g0544 11 4858034 4860504 ECH
Gso1g1531 1 51988635 51990850 Gso11g0544 11 4858034 4860504 GST