Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0543 ATGGCGTTCAGGAAAACCCTCGCTCAAGGACTCCTTAACATCACCAAAGTGTCATCACAATCCCTCACCAATTGTCGGATTTCCTCTTCCTCCGTCATCGGAAAAGTTTCCCCACGTGCCGCCGAGCCCGTTGATCCCGGAGAAAATGGCCGCTTCCGTTCGCCGCAACTCGCCGGAAGAAACCTCCTCGACAAGCTCAGGACGATGGGTGTTGCCCACAACCGGATCCGGTTGGATGGGTTGACGCCGCCGCAGATTAAAATGGTGGACACAGTGACCATCGAGGATGCCAGAAAATTGCTAAAGGTGGCGCAGGTGGAAATGTTGAAAGCGAAACTAAGACAGACCCGAAAGAGTTGCATAACGTTCTCGGAGTTCATTGCGATCTGCGCTGAGCATTGTTCGGATCAGGATCAAGCGGTGGAGATTGCAAAGATGTTGGATAATTCTGCGGCTGTGATTGTGTTGGGAGATGTCGTGTTTCTCAGACCCGAACAGGTAGCGAAAGCCATCCAAGGTCTTCTCCCTGTACCAGGAGCCAAGGTTCCCGAGTCAATAAGAAGAGAATTCGAAGAAATGGAGAAAAAGAGGTTAACCATTGACGACAGAGCAGACACCATGGTTCGGCGTGAGCTCTGGGGAGGGTTAGGTTTTATGATGGTGCAAACAATGGCATTCATGAGGCTTACATTTTGGGAACTCTCCTGGGATGTGATGGAACCCATATGTTTCTATTTGACCTCAATGTACTGCATGGCTTGCTACACCTTCTTCCTAAGGACCTCAAAAGAACCTTCCTTTGAAGGCTTCTACCAAGCCCGTTTCAGCTCCAAGCAGAAGCGACTCATGAAGCTTCACAATTTTGACATTGAAAAGTATAATCAACTCAGGGCGGCTTGCTCTCCCACCACCATGCCTCCTAAGTTTGATCCCTCCATGGCTCTCCCATTTGACAATTCTTCCATTCATCAATGA 975 0.4944 MAFRKTLAQGLLNITKVSSQSLTNCRISSSSVIGKVSPRAAEPVDPGENGRFRSPQLAGRNLLDKLRTMGVAHNRIRLDGLTPPQIKMVDTVTIEDARKLLKVAQVEMLKAKLRQTRKSCITFSEFIAICAEHCSDQDQAVEIAKMLDNSAAVIVLGDVVFLRPEQVAKAIQGLLPVPGAKVPESIRREFEEMEKKRLTIDDRADTMVRRELWGGLGFMMVQTMAFMRLTFWELSWDVMEPICFYLTSMYCMACYTFFLRTSKEPSFEGFYQARFSSKQKRLMKLHNFDIEKYNQLRAACSPTTMPPKFDPSMALPFDNSSIHQ* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0543 324 Coils Coil 94 114 - -
Gso11g0543 324 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 314 - -
Gso11g0543 324 Pfam Mitochondrial calcium uniporter 137 296 IPR006769 -
Gso11g0543 324 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 314 IPR039055 GO:0051560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0543 Gso-Chr11 4854381 4856860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0543 K20858 - gmx:100815180 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0543 11 4854381 4856860 Gso11g0543 11 4854381 4856860 ECH