Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0353 ATGCTTCTTCTGGTAAAACTTTGTCCTTCTCCACAAATTCGCCTTGTCTGCGTCAAAACCAATCTCAAAACACTCACCAAGGCTTCTTCTCAGAATTGCGTCGAAAGCAGCATGAGTTCTCTCACCAGTCTTGCTCCACTCGAAGCAGTGCTCTTTGATGTTGATGGAACTCTCTGTGATTCTGATCCACTCCACTATTATGCTTTGCGTGAAATGCTCCAAGAGCTTGGTTTTAATGGAGGTGCTCCTATAACAGAGGAATTCTTTGTTGAGACATTTTCTGGCAAGCACAGTGATGATACTGCCTTGGTTGTCTTTCCTGGTGATCTGGAACGAGGTTTAAAGTTTGTAGAAGATAAGGAAGCCATGTTCCGGAGATTGGCTTCAGAGCAACTGAATCCCTTGAAAGGCCTTGATAAAGTGAGGAAATGGGTTGAAAACCATGGTCTGAAGAGAGCTGCAGTCACCAATGCTCCAAGGAAAAATGCAGAACTCATTATCTCAAAACTTGGTCTAACAGATTTCTTTGATGCTGTTATTATTGGTGATGAATGTGAACATGCCAAACCTCATCCAGAACCCTACTTGAAAGCACTTGAAGTTCTGAAGGCATCAAAGGATCATGCATTTGTATTTGAGGATTCTGCTTCAGGGATAAAAGCTGGAGTGGCAGCTGGGATGCCTGTTATAGGTTTAGCTACAAGAAACCCGGAGAATTTACTGATGGAAGCAAAGCCTGCCTTTCTGATTAAGGATTATGAGGATTCAAAATTGTGGGCAGCTTTGGAAGAACTTGACAAGGCTGGTGCACGTTAA 816 0.4301 MLLLVKLCPSPQIRLVCVKTNLKTLTKASSQNCVESSMSSLTSLAPLEAVLFDVDGTLCDSDPLHYYALREMLQELGFNGGAPITEEFFVETFSGKHSDDTALVVFPGDLERGLKFVEDKEAMFRRLASEQLNPLKGLDKVRKWVENHGLKRAAVTNAPRKNAELIISKLGLTDFFDAVIIGDECEHAKPHPEPYLKALEVLKASKDHAFVFEDSASGIKAGVAAGMPVIGLATRNPENLLMEAKPAFLIKDYEDSKLWAALEELDKAGAR* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0353 271 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 47 257 - -
Gso11g0353 271 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 27 268 - -
Gso11g0353 271 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 47 257 - -
Gso11g0353 271 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 231 IPR006439 -
Gso11g0353 271 CDD HAD_BPGM-like 49 234 - -
Gso11g0353 271 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 27 268 - -
Gso11g0353 271 Gene3D Putative phosphatase; domain 2 62 130 IPR023198 -
Gso11g0353 271 SUPERFAMILY HAD-like 39 264 IPR036412 -
Gso11g0353 271 Pfam Haloacid dehalogenase-like hydrolase 50 231 IPR041492 -
Gso11g0353 271 Gene3D - 48 255 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0353 Gso-Chr11 3021628 3023879 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0353 - - ccaj:109800144 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1725 1 54027185 54030355 Gso11g0353 11 3021628 3023879 GST