Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0352 ATGACGGTTTCTTCTGAGAATTGCGTCTCTAGCAGCCAGAGTTCTCTCACTAGACTTGCTCCACTTGAAGCAGTGCTCTTTGATATAGATGGAACTCTTTGTGATTCTGATCCACTCCATTACTATGCCTTCCGCGAAATGCTTCTAGAGATTGGTTTTAATGAAGGTGTTCCTATAACAGAGGAATTTTTTATTGAGACTGTTGCTGGCAAACACAATGATGATATAGCCTCGGTTCTCTTTCCTGGTGATCTGGAACGAGGTTTAAAGTTTGTTGATGATAAGGAAGCCATGTTCCGGAGATTGGCCGCAGAGCAAGTGAAGCCTTTGAATGGCCTTGATAAAGTGAGGAAATGGATTGAAAATCATGGGCTGAAGAGAGCTGCAGTTACCAATGCTCCAAGGGCAAATGCAGAACTCATGATCTCAATACTTGGTCTCTCAGATTTCTTTGATGCTGTTATTATTGGTGGTGAATGTGAACGTGCCAAGCCTCATCCAGACCCCTACCTGAAAGGTCTTGAAGCTCTGAAGGCATCAAAAGATCACACATTTGTATTTGAGGATTCTGTTTCAGGGATCAAAGCTGGAGTTGCAGCTGGGATGCCTGTTATTGGTATAGCTACTCGTAACCCGGAAAATTTATTGATGGAAGCAAAACCTGCCTTTCTGATTAAGGATTATGAGGATCCAAAATTGTGGGCTGCTTTGGAAGAACTTGACAAGGCTGGTGCATTTAGTTTGAATTACTAG 753 0.4263 MTVSSENCVSSSQSSLTRLAPLEAVLFDIDGTLCDSDPLHYYAFREMLLEIGFNEGVPITEEFFIETVAGKHNDDIASVLFPGDLERGLKFVDDKEAMFRRLAAEQVKPLNGLDKVRKWIENHGLKRAAVTNAPRANAELMISILGLSDFFDAVIIGGECERAKPHPDPYLKGLEALKASKDHTFVFEDSVSGIKAGVAAGMPVIGIATRNPENLLMEAKPAFLIKDYEDPKLWAALEELDKAGAFSLNY* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0352 250 SUPERFAMILY HAD-like 19 239 IPR036412 -
Gso11g0352 250 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 22 230 - -
Gso11g0352 250 Gene3D - 23 231 IPR023214 -
Gso11g0352 250 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 22 230 - -
Gso11g0352 250 PANTHER 6-PHOSPHOGLUCONATE PHOSPHATASE 4 243 - -
Gso11g0352 250 Pfam Haloacid dehalogenase-like hydrolase 25 207 IPR041492 -
Gso11g0352 250 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 98 207 IPR006439 -
Gso11g0352 250 Gene3D Putative phosphatase; domain 2 37 105 IPR023198 -
Gso11g0352 250 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN-CONTAINING PROTEIN SGPP 4 243 - -
Gso11g0352 250 CDD HAD_BPGM-like 24 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g0352 Gso-Chr11 3018107 3020803 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0352 - - gmx:100802762 489.189