Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g0330 ATGGTTCAATTCCACGAGCACATAATCACAGAGCTTCTAGAAGACTCCAATGGCGGTCTCGTCATTCTCTCCTCGGGCCTCGCTCTCTCCAAACTCATCGCTTCTCTTCTCATTCTACACTCCTCATCTCAGGGCACGCTCCTCCTCCTCTCACCGTCCTCCACTTCCCTCAAATCCAAAATCACCTTCCACCTCAAAACCCTAAACCCCCAATTCTACCAAATTCCCGCCGAAATCACCGCCGACCTCCACGCGCCCCACCGCCACGCACTCTACACCTCCGGCAACGCCTTCTTCATCACCCCGCGGATCCTAATCGTCGACCTCCTAACTAACAAGTTACCGACCTCCAAGATCGCCGGCATAATCATCCTCAACGCGCACTCGCTCTCCGAGACTTCCACCGAAGCCTTCATCGTTCGGATTTTCCGGTCGCTGAACCGCGGCGCGTATGTCCGGGCGTTCTCCGACAAGCCGCACGCGATGGTGTCGGGGTTCGCGAAGGCGGAGCGGACGATGAAGTGCCTGCACGTGCGGAAGCTGCACCTGTGGCCGCGGTTTCAGGTGTACGTGTCGCAGGAGCTTGAGAGGGACCCGCCGGAGGTGGTGGATATAAGGGTGCCGATGAGCAGGTACATGGTGGGGATTCAGAAGGCCATTGTTGAGGTCATGGATGCGTGTTTAAAGGAGATGAGGAAGACCAACAAGGTCGACGTGGAGGATCTGACGGTGGAGAATGGGTTGTTCAAGTCCTTCGATGAGATTGTGAGGAGACAGTTGGATCCAATTTGGCACACATTGGGGAAAAAGACTAAGCAGCTCGTGTCAGACCTCAAGACTTTGAGGAAGCTGTTGGATTATCTAGTCAGGTACGATGCAGTAACTTACTTGAAATATTTGGATACACTGAGAGTGTCAGAGAGTTTTCGGTCAGTTTGGATATTTGCTGAGGCAAGCTATAAGATATTTGACTATGCAAAGAAGCGTGTTTTTCATCTTGTGAGAGCAGATGGTGTGAAATTTAACGAGTCAAGTAAGAGTGTCAAAAACAAAAAGAGAAGAACTAAGGGTGATGACAAAGACATTGAAGAAGTTGATGGCACTTCATCATCTAGTTCAAATGCTGGCTTAATTTTGGAGGAAGTTTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTAATGTTCTTGAGGAAGTAGAAGAGGAAAGACAAAAGCAAGGTATGTTGAGGGAAGAAGTATTGGCTGAAGGTGAAGACACTAACAATGGCATTGTATTAGTGGCATGTAAAGATGAAAGATCGTGCTTGCAACTTGAAGAATGCATCACCAACGGTCCAAAAAAGGTCATGCATGAGGAATGGAAGAAGTATTTACTAAACAAAGTACAGCTGCGTGACATAGTGAATAAGAAAAAGAAGCCTAAGGATCCCAAACCCAAAGGTTTTGGGATTCTTGATGGAGTTACTCCCATAAAACCTGTTCAGAGTGCAGAAACCACCAGCATTAGTAAGCAAGAGCATGATGCGCTTTTGGCAGCAGCATCAAAACTGCGGAATATTGCTGAAAATGATCATGTTGGTGAAGATACCCCTCAGCCTGATTCTGGTGGACAGGGTCGTGCTAAAAGAAAGAGGAAAGTGGGGATTAGAAATGACCCTGTCATTCTTGATGGTTCTGGAGTTCAGAACAATAATAAAGCGCAATCAACAAGTGATAAAATTGGAATGTCTGATTCAAAAAATAAAATCGATGAAGATGAGACTAATCCTATCAGTGCAGGTAGATTTTGTGAAACCATGCAGGGTGAGACATCTGTGGAAAATATAGTTCTTCGAAGGCATACTAATCCTGATGCTGCAGCTAGAAATGGGAAATCACTACCACCAGTGTATTTTTATGCCCTAGAAAGTGATCAGCCTATACTGGATATATTAAAGCCCTCTATAGTCATTGTTTACCATCCAGATATGACCTTTGTTAGGGAAATTGAAGTCTACAAAGCTGAGAATCCCTCAAAAAGGTTGAAAGTATATTTTATTTTCTATGAAGATTCAAGTGAGGTTCAGAAGTTTGAAGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTAATTAGGCAAAAATCTTTGATGATGATTCCAGTTGACCAGAGTGGGCATTCTTTAGGATTGAATTCTACTTTAGAGTCAGATTTAAATACTCCTCAAAACTTCGTAACCAGAAAAGCAGGTGGGAGAAAGGAAGCTGAGAAAGAAATGCAGGTTATTGTGGACATGCGGGAGTTCATGAGCAGCCTTCCAAATGTTCTTCATCAAAAGGGAATGAACATCATTCCAGTGACCCTAGAAGTTGGTGACTATATTCTATCACCATTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTCTTTATGAGCTTCACATCAGGTCGTCTATACCACCAGGTGGAGACAATGGTACGATATTACAGAATACCTGTACTCTTGATCGAGTTTTCACAGGATAAGAGCTTTTCATTCCAGTCTGCTAGTGATATTGGTGATGATGTGACACCAAATAGCATTATATCAAAGTTGTCTTTGCTTGCTCTACACTTCCCCCGACTACGAATAATCTGGTCTCGAAGTTTGCATGCTACTGCCGAAATATTTGCTTCACTGAAGGCAAATCAAGACGAGCCAGATGAAACAAAAGCAATCAGAGTGGGTGTCCCTTCGGAAGAAGGAATTGTGGAAAATGATGTGAGGGCTGAAAATTACAATACATCCGCTGTGGAGTTTCTAAGACGATGTCCAGGTGTTACAGACTCAAACTACAGGGCCATAATGGATGGCTGTAAGAGCTTGGCAGAACTTGCACTTCTTCCTGTAGAGAAGTTAGCGGAATTAATGGGTGGTCATAAAGCTGCTAGGACTCTTAGAGATTTTCTAGATGCTAAATACCCAACTTTGTTGTGA 2961 0.4424 MVQFHEHIITELLEDSNGGLVILSSGLALSKLIASLLILHSSSQGTLLLLSPSSTSLKSKITFHLKTLNPQFYQIPAEITADLHAPHRHALYTSGNAFFITPRILIVDLLTNKLPTSKIAGIIILNAHSLSETSTEAFIVRIFRSLNRGAYVRAFSDKPHAMVSGFAKAERTMKCLHVRKLHLWPRFQVYVSQELERDPPEVVDIRVPMSRYMVGIQKAIVEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVFHLVRADGVKFNESSKSVKNKKRRTKGDDKDIEEVDGTSSSSSNAGLILEEVLEEAPKWKVLRNVLEEVEEERQKQGMLREEVLAEGEDTNNGIVLVACKDERSCLQLEECITNGPKKVMHEEWKKYLLNKVQLRDIVNKKKKPKDPKPKGFGILDGVTPIKPVQSAETTSISKQEHDALLAAASKLRNIAENDHVGEDTPQPDSGGQGRAKRKRKVGIRNDPVILDGSGVQNNNKAQSTSDKIGMSDSKNKIDEDETNPISAGRFCETMQGETSVENIVLRRHTNPDAAARNGKSLPPVYFYALESDQPILDILKPSIVIVYHPDMTFVREIEVYKAENPSKRLKVYFIFYEDSSEVQKFEASIRRENGAFESLIRQKSLMMIPVDQSGHSLGLNSTLESDLNTPQNFVTRKAGGRKEAEKEMQVIVDMREFMSSLPNVLHQKGMNIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAIRVGVPSEEGIVENDVRAENYNTSAVEFLRRCPGVTDSNYRAIMDGCKSLAELALLPVEKLAELMGGHKAARTLRDFLDAKYPTLL* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g0330 986 SUPERFAMILY Restriction endonuclease-like 752 890 IPR011335 -
Gso11g0330 986 MobiDBLite consensus disorder prediction 523 591 - -
Gso11g0330 986 PANTHER DNA REPAIR ENDONUCLEASE XPF 2 982 - -
Gso11g0330 986 SMART ERCC4_2 755 835 IPR006166 GO:0003677|GO:0004518
Gso11g0330 986 SUPERFAMILY RuvA domain 2-like 917 981 IPR010994 -
Gso11g0330 986 MobiDBLite consensus disorder prediction 347 366 - -
Gso11g0330 986 MobiDBLite consensus disorder prediction 577 591 - -
Gso11g0330 986 MobiDBLite consensus disorder prediction 557 576 - -
Gso11g0330 986 Coils Coil 392 416 - -
Gso11g0330 986 Gene3D - 913 984 - -
Gso11g0330 986 Pfam ERCC4 domain 758 887 IPR006166 GO:0003677|GO:0004518
Gso11g0330 986 MobiDBLite consensus disorder prediction 347 372 - -
Gso11g0330 986 Gene3D - 755 902 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g0330 K10848 - gmx:100812359 1861.66