LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso11g0324	ATGGCTTCTCAAGTTCTTCTTCAACAGGCACTGTTTGCCCCCAAGCTAAGTTTCCCTTCTTCTTCTCGTAACGTCGCGTTAATTTCTAGGGTTCCTTCCACCCCAATTTCATGGCGTTGCACTCCTCTCATTGCTAAGCCTAGTTTCGCTGTGAGAGCTGACTCCAACGTCGAAGGCGCTGGTGAAGCCACCGAGGATGTTCCTTCGTATAATGTTGATGAAGTTTCGGAAGGCGAAGGAGAACAAGTTTCGGATTCTGAAGCTCCAAAATCTCCCAGAAAACCCCGAGTCAAGCTCGGAGACGTCATGGGGATACTGAATCAGAGGGCAATTGAGGCATCCGAGAAGCAAAGGCCAACTCCAGACATTAGGACTGGGGATATTGTCGAAATCAAATTGGAGGTTCCTGAGAACAAGCGTAGGTTGTCCATTTACAAAGGGATTGTCATCTCAAAGCAAAATGCTGGTATTCACACAACTATTCGAATCCGAAGAATCATTGCTGGCACAGGGGTTGAGATAGTCTTCCCAGTTTACTCACCAAACATCAAAGAAATCAGAGTGGTAAGCCACCGTAAGGTCAGGAGAGCAAGATTGTACTATCTGAGAGACAAGCTTCCGAGATTCTCCACTTTCAAGTGA	642	0.4673	MASQVLLQQALFAPKLSFPSSSRNVALISRVPSTPISWRCTPLIAKPSFAVRADSNVEGAGEATEDVPSYNVDEVSEGEGEQVSDSEAPKSPRKPRVKLGDVMGILNQRAIEASEKQRPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPVYSPNIKEIRVVSHRKVRRARLYYLRDKLPRFSTFK*	214

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso11g0324	213	PANTHER	50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED	22	213	-	-
	Gso11g0324	213	MobiDBLite	consensus disorder prediction	57	96	-	-
	Gso11g0324	213	Pfam	Ribosomal protein L19	110	206	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Gso11g0324	213	SUPERFAMILY	Translation proteins SH3-like domain	110	213	IPR008991	-
	Gso11g0324	213	TIGRFAM	rplS_bact: ribosomal protein bL19	110	205	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Gso11g0324	213	Gene3D	-	95	211	IPR038657	-
	Gso11g0324	213	PANTHER	RIBOSOMAL PROTEIN L19	22	213	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Gso11g0324	213	PRINTS	Ribosomal protein L19 signature	107	136	IPR001857	GO:0003735\|GO:0005840\|GO:0006412
	Gso11g0324	213	PRINTS	Ribosomal protein L19 signature	166	189	IPR001857	GO:0003735\|GO:0005840\|GO:0006412

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso11g0324	Gso-Chr11	2730191	2732338	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso11g0324	K02884		-	gmx:100305649	404.445

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso1g1751	1	54313892	54316038	Gso11g0324	11	2730191	2732338	GST